Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487191

Identifier: 103487191

GI number: 103487191

Start: 1796119

End: 1797180

Strand: Reverse

Name: 103487191

Synonym: Sala_1706

Alternate gene names: NA

Gene position: 1797180-1796119 (Counterclockwise)

Preceding gene: 103487192

Following gene: 103487189

Centisome position: 53.72

GC content: 65.35

Gene sequence:

>1062_bases
ATGACCATGGCAATCAATGAAGAGAAGCTGCACGGCTTCGTCGGCAAGATGCTGGGCGATGTCGGCGGCGGGATGAGCGT
GCCCACGGTGCGGCTGGGTTTCCGGCTCGGCCTGTTCGACGCGCTCGCGCAGGCGCCGGCGACGGCGGGCGAACTCGCGG
CGCGCGCGGGCGGGTTGCACGAACGCTATGTCCGCGAATGGGCGCTCGCGCAGGCGGCGAACGGTTATATCGATTATGAC
GCGGCTGCGGAGCGCTTCAGCATCTCGCCCGAACAGGCGATGGTGTTCGTGCACAGGGACAGTCCCGTCTATCTCGCGGG
CGCGTTCGAGATTATCGCCGCGATGATCGAGGCGGAAGCGAGAGTTGAGCAATGCTTTCGCAACGGGACGGGCGTGCGCT
GGGGTGATCATGCGGGCTGTCTTTTCTGTGCGACGGGCGCCTTTTTTCGGCCGGGTTATGTCAACAATATCGTCCAGGCG
TGGATCCCCGCGCTCGATGGCGTCGAGGCGAAGCTGAAAAAAGGCGCGCGCGTCGCCGACGTCGGATGCGGCGTCGGCTT
TTCGACGCTGCTGATGGCCGACGCCTATCCCGCAAGCGAATTCGTCGGCTTTGACTTCCACGCGCCGTCGATCGACGAGG
CGCGGCGTCACGCCGAAGGGCATGGCTATGGCGACCGGGTGCGGTTCGAAGTCGCGGCGGCGAAGGAAATCGAAGAGGAT
GGTTTCGATCTGATCACCATGTACGACTGCCTGCACGATATGGGCGATCCGCGTGGCTGCGCCCGGCATATGCGCCAGAT
GCTGGCGTCCGATGGATGCTGGATGATCGTCGAACCGATCGCGGGCGACACGCCCGCGGAGAATATGAACCCGGTCGGGC
GGCTCTATTACAATGCGTCGACGATGATCTGCGTGCCGACGTCGCTCGATCAGGAAGTCGGGGAGGGGCTTGGCGCGCAG
GCGGGTGAGGCGCGGCTGGCGCAGATCGTCCGCGAGGGCGGTTTCGCCAGCGTGCGGCGCGCGACCGAGGGGCCGTTCAA
CATGGTTCTCGAGGCGCGGTGA

Upstream 100 bases:

>100_bases
GAGGCGGGCGCGTGCCGTGCCGCCACCACTATGCTATGCTGGGCGCCTCAACGGGAGCTTCTGGCGAGTCGCGCTGTCCT
GATCGGCGAGGAGCGGAAGA

Downstream 100 bases:

>100_bases
GGCTTCGCGGCGACGGGCCGAAATCTTTGAAGGATCAGATCGGCGACCAGTCGCCGCCCTTTTCCTCTTCGTCGGCATCG
GGCCCCGGTTCGGGCTGGCC

Product: methyltransferase type 12

Products: NA

Alternate protein names: Methyltransferase; Transcriptional Regulatory Protein; Transcriptional Regulator; SAM-Dependent Methyltransferase; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Protein; Methyltransferase Domain Family

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTMAINEEKLHGFVGKMLGDVGGGMSVPTVRLGFRLGLFDALAQAPATAGELAARAGGLHERYVREWALAQAANGYIDYD
AAAERFSISPEQAMVFVHRDSPVYLAGAFEIIAAMIEAEARVEQCFRNGTGVRWGDHAGCLFCATGAFFRPGYVNNIVQA
WIPALDGVEAKLKKGARVADVGCGVGFSTLLMADAYPASEFVGFDFHAPSIDEARRHAEGHGYGDRVRFEVAAAKEIEED
GFDLITMYDCLHDMGDPRGCARHMRQMLASDGCWMIVEPIAGDTPAENMNPVGRLYYNASTMICVPTSLDQEVGEGLGAQ
AGEARLAQIVREGGFASVRRATEGPFNMVLEAR

Sequences:

>Translated_353_residues
MTMAINEEKLHGFVGKMLGDVGGGMSVPTVRLGFRLGLFDALAQAPATAGELAARAGGLHERYVREWALAQAANGYIDYD
AAAERFSISPEQAMVFVHRDSPVYLAGAFEIIAAMIEAEARVEQCFRNGTGVRWGDHAGCLFCATGAFFRPGYVNNIVQA
WIPALDGVEAKLKKGARVADVGCGVGFSTLLMADAYPASEFVGFDFHAPSIDEARRHAEGHGYGDRVRFEVAAAKEIEED
GFDLITMYDCLHDMGDPRGCARHMRQMLASDGCWMIVEPIAGDTPAENMNPVGRLYYNASTMICVPTSLDQEVGEGLGAQ
AGEARLAQIVREGGFASVRRATEGPFNMVLEAR
>Mature_352_residues
TMAINEEKLHGFVGKMLGDVGGGMSVPTVRLGFRLGLFDALAQAPATAGELAARAGGLHERYVREWALAQAANGYIDYDA
AAERFSISPEQAMVFVHRDSPVYLAGAFEIIAAMIEAEARVEQCFRNGTGVRWGDHAGCLFCATGAFFRPGYVNNIVQAW
IPALDGVEAKLKKGARVADVGCGVGFSTLLMADAYPASEFVGFDFHAPSIDEARRHAEGHGYGDRVRFEVAAAKEIEEDG
FDLITMYDCLHDMGDPRGCARHMRQMLASDGCWMIVEPIAGDTPAENMNPVGRLYYNASTMICVPTSLDQEVGEGLGAQA
GEARLAQIVREGGFASVRRATEGPFNMVLEAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17562972, Length=325, Percent_Identity=28.6153846153846, Blast_Score=123, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI17562552, Length=350, Percent_Identity=26.2857142857143, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17562982, Length=333, Percent_Identity=25.5255255255255, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI193208453, Length=224, Percent_Identity=26.7857142857143, Blast_Score=79, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38056; Mature: 37924

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMAINEEKLHGFVGKMLGDVGGGMSVPTVRLGFRLGLFDALAQAPATAGELAARAGGLH
CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
ERYVREWALAQAANGYIDYDAAAERFSISPEQAMVFVHRDSPVYLAGAFEIIAAMIEAEA
HHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHH
RVEQCFRNGTGVRWGDHAGCLFCATGAFFRPGYVNNIVQAWIPALDGVEAKLKKGARVAD
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEE
VGCGVGFSTLLMADAYPASEFVGFDFHAPSIDEARRHAEGHGYGDRVRFEVAAAKEIEED
CCCCCCHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHC
GFDLITMYDCLHDMGDPRGCARHMRQMLASDGCWMIVEPIAGDTPAENMNPVGRLYYNAS
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCC
TMICVPTSLDQEVGEGLGAQAGEARLAQIVREGGFASVRRATEGPFNMVLEAR
EEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
TMAINEEKLHGFVGKMLGDVGGGMSVPTVRLGFRLGLFDALAQAPATAGELAARAGGLH
CCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
ERYVREWALAQAANGYIDYDAAAERFSISPEQAMVFVHRDSPVYLAGAFEIIAAMIEAEA
HHHHHHHHHHHHCCCCEECCCHHHHCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHH
RVEQCFRNGTGVRWGDHAGCLFCATGAFFRPGYVNNIVQAWIPALDGVEAKLKKGARVAD
HHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCEEEE
VGCGVGFSTLLMADAYPASEFVGFDFHAPSIDEARRHAEGHGYGDRVRFEVAAAKEIEED
CCCCCCHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCEEEEEEHHHHHHHHC
GFDLITMYDCLHDMGDPRGCARHMRQMLASDGCWMIVEPIAGDTPAENMNPVGRLYYNAS
CCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEECCC
TMICVPTSLDQEVGEGLGAQAGEARLAQIVREGGFASVRRATEGPFNMVLEAR
EEEEECCCCCHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA