| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is fixI [H]
Identifier: 103487155
GI number: 103487155
Start: 1757617
End: 1759563
Strand: Reverse
Name: fixI [H]
Synonym: Sala_1670
Alternate gene names: 103487155
Gene position: 1759563-1757617 (Counterclockwise)
Preceding gene: 103487156
Following gene: 103487154
Centisome position: 52.6
GC content: 70.42
Gene sequence:
>1947_bases ATGCCCGACCTCATCGGCGCCTTTTCGACCCTGGGGTTCGAGGCGCACCCGCTGGGCAACGGTGCAGATGCAACCGACGT CGGTGCCGAAACGAGCCGCGAGCTGCTGCGCGCGGTCGCGGTATCGGGCTTTGCGATGATGAACATCATGCTGCTGTCGG TGTCGATCTGGTCGGGTGCGGCGGGTGCGACGCGCGACCTGTTCCACTGGCTGTCCGCCGCGATCGCGCTGCCGACGATC ACCTATGCCGGACGCCCGTTTTTCCGCTCGGCATGGCGCGCGCTGCGGCACGGGGGCACCAATATGGACGTTCCGATCAG CATCGGCGTCGCGCTCGTCTGTGCTATGAGCCTTTACGAGACGGCGTCGAGCGGCCCGCATGCCTATTTCGATGGCGCGG TGATGCTGCTCTTCTTTCTGCTCACCGGCCGCTGGCTCGACAGCGTGATGCGCGACCGCGCGCGGGGCGGAGTCGCGGCG CTGCTGCGCAACATGGGGACGGGCGCGATGGTGATCGGGGTCGACGGGGACAGCCGATGGGTCGATGCGACGGCGCTCGA ACCGGGGATGGAGATGCTGGTGGCGGCGGGCGAACGGCTGGCCGCCGACGGGGTGGTTGTGGCGGGCGAAAGTCGGTTCG ACCTGTCGCTACTGACCGGAGAGAGCGCGCCGGTTGCGGCGCAAGTCGATGATCGCGTCCATGCCGGCACGCTCAATCTC GACGCGCCGATCCGCGTGCGCGTCACTGCCGCGGGAGCCGACACCGCGATCGCGGACATCGCGCGGCTTATGGGCGAGGC GGCGCAGGGCAAGTCGCGCCATGTCCGTATCGCCGACCGTGCCGCGCGCTTCTATGCCCCCGCGGTCCACGCGCTCGCTC TGCTCGCTTTCGCCGGGTGGATGATCGCGGGGGCGGGCTGGCATCAAAGCCTGCTGGTCGCCGCGGCGGTGCTCATCATC ACCTGCCCCTGCGCGCTGGGCCTCGCCGTCCCGGCGGCGCAGATCGTCGCGGCGGGCGAATTGATGCGCGCAGGCGTGCT CGTGAAGGACGGATCGGCACTTGAACGGCTGGCCGAGGTCGACCTCGCGCTCGTCGACAAGACCGGGACGCTGACGCTTG GGCGTCCCGAAGCGATGGGGCTCGACCGGCTGGACGCGGAGGTGCGCTCGCTGACCCTTGCGCTTGCGCGGGCGAGCCGC CACCCGCTGAGCGCGGCGTTGACGCGCGAGCTTCAGGCAGGCGGTGTCCGGGCCGCTCGGGTGGAGGCGATCCGCGAAAC GCCGGGCGTCGGGATCGAGGCGCGCTGGCGCGGCCGGGTCGTGACGCTGGGGCGACCGCAGGGCAGCGATCTTGGCAACG CGCTTGCCACCGAACTGGCCGTCGACGGTCGCCCGGTCGCGACGATCACCTTTGCCGACCCTTTGCGCCCTGACGCCGCC GAGGCGGTCGATGCCCTGGAGCGGGACGGCGTCGCAGCGATGATATTGTCGGGCGACCGCGCCGAAGCCGTCGCGCCGGT TGCCCGCGACCTGCGCCTGACGGCGCAGACGGGGATGAGCCCGCAGGACAAGCTGGCCGCGATCGCGCGGCAGGCGGCAC GGGGGCGCAAGGTGCTGATGATCGGCGACGGGCTCAACGACGGTCCGGCGCTCGCGGCGGGCCATGCTTCGATGGCGCCG GGGTCGGCGAGCGATGTCGGCAAGAATGCCGCCGATTGCATCTTCCTCGGCGACAGGATGATGCCCGTGGTGCAGGCGCT CCGTATGGCGCGGCGGACGCAGGCGGTGGTGCGGCAGAACTTTCTGCTCGCGATCGGCTATAATGTCGTCGCGGTGCCGC TCGCCTTCATGGGGCTGGTCACGCCGCTCGTCGCGGCGATCGCCATGTCGGGATCGTCGCTGATCGTCGTCGGCAATGCG CTGCGGCTGAAAAGGGCAATCCGGTGA
Upstream 100 bases:
>100_bases CAAGCTGGAGCAGGGGCTGGTGCGCGACAGGCGCATCGCGACGGCACGCGTCAATTTCACCGAAAAGCGCGTGCATCTGA CGCATACGCCCGACGCCCGG
Downstream 100 bases:
>100_bases ACGGGCTGGCCTTGCTCATCCCGATCGCGCTGGGGCTGGGCCTGCTTGGGCTCGCGGCCTTTTTCTGGTCGCTCGGCAAG GGACAGTTCGACGATCTTGA
Product: heavy metal translocating P-type ATPase
Products: ADP; Orthophosphate. [C]
Alternate protein names: E1-E2 type cation ATPase FixI [H]
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MPDLIGAFSTLGFEAHPLGNGADATDVGAETSRELLRAVAVSGFAMMNIMLLSVSIWSGAAGATRDLFHWLSAAIALPTI TYAGRPFFRSAWRALRHGGTNMDVPISIGVALVCAMSLYETASSGPHAYFDGAVMLLFFLLTGRWLDSVMRDRARGGVAA LLRNMGTGAMVIGVDGDSRWVDATALEPGMEMLVAAGERLAADGVVVAGESRFDLSLLTGESAPVAAQVDDRVHAGTLNL DAPIRVRVTAAGADTAIADIARLMGEAAQGKSRHVRIADRAARFYAPAVHALALLAFAGWMIAGAGWHQSLLVAAAVLII TCPCALGLAVPAAQIVAAGELMRAGVLVKDGSALERLAEVDLALVDKTGTLTLGRPEAMGLDRLDAEVRSLTLALARASR HPLSAALTRELQAGGVRAARVEAIRETPGVGIEARWRGRVVTLGRPQGSDLGNALATELAVDGRPVATITFADPLRPDAA EAVDALERDGVAAMILSGDRAEAVAPVARDLRLTAQTGMSPQDKLAAIARQAARGRKVLMIGDGLNDGPALAAGHASMAP GSASDVGKNAADCIFLGDRMMPVVQALRMARRTQAVVRQNFLLAIGYNVVAVPLAFMGLVTPLVAAIAMSGSSLIVVGNA LRLKRAIR
Sequences:
>Translated_648_residues MPDLIGAFSTLGFEAHPLGNGADATDVGAETSRELLRAVAVSGFAMMNIMLLSVSIWSGAAGATRDLFHWLSAAIALPTI TYAGRPFFRSAWRALRHGGTNMDVPISIGVALVCAMSLYETASSGPHAYFDGAVMLLFFLLTGRWLDSVMRDRARGGVAA LLRNMGTGAMVIGVDGDSRWVDATALEPGMEMLVAAGERLAADGVVVAGESRFDLSLLTGESAPVAAQVDDRVHAGTLNL DAPIRVRVTAAGADTAIADIARLMGEAAQGKSRHVRIADRAARFYAPAVHALALLAFAGWMIAGAGWHQSLLVAAAVLII TCPCALGLAVPAAQIVAAGELMRAGVLVKDGSALERLAEVDLALVDKTGTLTLGRPEAMGLDRLDAEVRSLTLALARASR HPLSAALTRELQAGGVRAARVEAIRETPGVGIEARWRGRVVTLGRPQGSDLGNALATELAVDGRPVATITFADPLRPDAA EAVDALERDGVAAMILSGDRAEAVAPVARDLRLTAQTGMSPQDKLAAIARQAARGRKVLMIGDGLNDGPALAAGHASMAP GSASDVGKNAADCIFLGDRMMPVVQALRMARRTQAVVRQNFLLAIGYNVVAVPLAFMGLVTPLVAAIAMSGSSLIVVGNA LRLKRAIR >Mature_647_residues PDLIGAFSTLGFEAHPLGNGADATDVGAETSRELLRAVAVSGFAMMNIMLLSVSIWSGAAGATRDLFHWLSAAIALPTIT YAGRPFFRSAWRALRHGGTNMDVPISIGVALVCAMSLYETASSGPHAYFDGAVMLLFFLLTGRWLDSVMRDRARGGVAAL LRNMGTGAMVIGVDGDSRWVDATALEPGMEMLVAAGERLAADGVVVAGESRFDLSLLTGESAPVAAQVDDRVHAGTLNLD APIRVRVTAAGADTAIADIARLMGEAAQGKSRHVRIADRAARFYAPAVHALALLAFAGWMIAGAGWHQSLLVAAAVLIIT CPCALGLAVPAAQIVAAGELMRAGVLVKDGSALERLAEVDLALVDKTGTLTLGRPEAMGLDRLDAEVRSLTLALARASRH PLSAALTRELQAGGVRAARVEAIRETPGVGIEARWRGRVVTLGRPQGSDLGNALATELAVDGRPVATITFADPLRPDAAE AVDALERDGVAAMILSGDRAEAVAPVARDLRLTAQTGMSPQDKLAAIARQAARGRKVLMIGDGLNDGPALAAGHASMAPG SASDVGKNAADCIFLGDRMMPVVQALRMARRTQAVVRQNFLLAIGYNVVAVPLAFMGLVTPLVAAIAMSGSSLIVVGNAL RLKRAIR
Specific function: FixI is a pump of a specific cation involved in symbiotic nitrogen fixation. The four proteins FixG, FixH, FixI, and FixS may participate in a membrane-bound complex coupling the FixI cation pump with a redox process catalyzed by FixG [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=637, Percent_Identity=27.7864992150706, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI115529486, Length=384, Percent_Identity=29.9479166666667, Blast_Score=177, Evalue=3e-44, Organism=Homo sapiens, GI55743073, Length=556, Percent_Identity=26.7985611510791, Blast_Score=168, Evalue=2e-41, Organism=Escherichia coli, GI1786691, Length=608, Percent_Identity=33.2236842105263, Blast_Score=266, Evalue=4e-72, Organism=Escherichia coli, GI1789879, Length=579, Percent_Identity=32.9879101899827, Blast_Score=238, Evalue=1e-63, Organism=Escherichia coli, GI1786914, Length=471, Percent_Identity=26.5392781316348, Blast_Score=84, Evalue=4e-17, Organism=Caenorhabditis elegans, GI17556548, Length=659, Percent_Identity=25.7966616084977, Blast_Score=195, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6319772, Length=662, Percent_Identity=26.1329305135952, Blast_Score=200, Evalue=6e-52, Organism=Saccharomyces cerevisiae, GI6320475, Length=609, Percent_Identity=26.1083743842365, Blast_Score=199, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6325221, Length=517, Percent_Identity=22.8239845261122, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321430, Length=517, Percent_Identity=22.8239845261122, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI221329854, Length=428, Percent_Identity=31.5420560747664, Blast_Score=169, Evalue=5e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 67340; Mature: 67209
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: PS00154 ATPASE_E1_E2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDLIGAFSTLGFEAHPLGNGADATDVGAETSRELLRAVAVSGFAMMNIMLLSVSIWSGA CCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGATRDLFHWLSAAIALPTITYAGRPFFRSAWRALRHGGTNMDVPISIGVALVCAMSLYE CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH TASSGPHAYFDGAVMLLFFLLTGRWLDSVMRDRARGGVAALLRNMGTGAMVIGVDGDSRW HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCE VDATALEPGMEMLVAAGERLAADGVVVAGESRFDLSLLTGESAPVAAQVDDRVHAGTLNL EEHHHCCCHHHHHHHCCCHHCCCCEEEECCCCCEEEEEECCCCCEEEECCCCEECCEECC DAPIRVRVTAAGADTAIADIARLMGEAAQGKSRHVRIADRAARFYAPAVHALALLAFAGW CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH MIAGAGWHQSLLVAAAVLIITCPCALGLAVPAAQIVAAGELMRAGVLVKDGSALERLAEV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHC DLALVDKTGTLTLGRPEAMGLDRLDAEVRSLTLALARASRHPLSAALTRELQAGGVRAAR CEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH VEAIRETPGVGIEARWRGRVVTLGRPQGSDLGNALATELAVDGRPVATITFADPLRPDAA HHHHHHCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHEECCCCEEEEEECCCCCCCHH EAVDALERDGVAAMILSGDRAEAVAPVARDLRLTAQTGMSPQDKLAAIARQAARGRKVLM HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHCCCEEEE IGDGLNDGPALAAGHASMAPGSASDVGKNAADCIFLGDRMMPVVQALRMARRTQAVVRQN EECCCCCCCCEECCCCCCCCCCCHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHC FLLAIGYNVVAVPLAFMGLVTPLVAAIAMSGSSLIVVGNALRLKRAIR EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCC >Mature Secondary Structure PDLIGAFSTLGFEAHPLGNGADATDVGAETSRELLRAVAVSGFAMMNIMLLSVSIWSGA CCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC AGATRDLFHWLSAAIALPTITYAGRPFFRSAWRALRHGGTNMDVPISIGVALVCAMSLYE CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH TASSGPHAYFDGAVMLLFFLLTGRWLDSVMRDRARGGVAALLRNMGTGAMVIGVDGDSRW HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCCCCE VDATALEPGMEMLVAAGERLAADGVVVAGESRFDLSLLTGESAPVAAQVDDRVHAGTLNL EEHHHCCCHHHHHHHCCCHHCCCCEEEECCCCCEEEEEECCCCCEEEECCCCEECCEECC DAPIRVRVTAAGADTAIADIARLMGEAAQGKSRHVRIADRAARFYAPAVHALALLAFAGW CCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH MIAGAGWHQSLLVAAAVLIITCPCALGLAVPAAQIVAAGELMRAGVLVKDGSALERLAEV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHC DLALVDKTGTLTLGRPEAMGLDRLDAEVRSLTLALARASRHPLSAALTRELQAGGVRAAR CEEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH VEAIRETPGVGIEARWRGRVVTLGRPQGSDLGNALATELAVDGRPVATITFADPLRPDAA HHHHHHCCCCCEEEEECCEEEEECCCCCCCHHHHHHHHHEECCCCEEEEEECCCCCCCHH EAVDALERDGVAAMILSGDRAEAVAPVARDLRLTAQTGMSPQDKLAAIARQAARGRKVLM HHHHHHHHCCEEEEEECCCCHHHHHHHHHHHEEHHHCCCCHHHHHHHHHHHHHCCCEEEE IGDGLNDGPALAAGHASMAPGSASDVGKNAADCIFLGDRMMPVVQALRMARRTQAVVRQN EECCCCCCCCEECCCCCCCCCCCHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHC FLLAIGYNVVAVPLAFMGLVTPLVAAIAMSGSSLIVVGNALRLKRAIR EEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA