| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103487154
Identifier: 103487154
GI number: 103487154
Start: 1757465
End: 1757620
Strand: Reverse
Name: 103487154
Synonym: Sala_1669
Alternate gene names: NA
Gene position: 1757620-1757465 (Counterclockwise)
Preceding gene: 103487155
Following gene: 103487153
Centisome position: 52.54
GC content: 65.38
Gene sequence:
>156_bases GTGAACGGGCTGGCCTTGCTCATCCCGATCGCGCTGGGGCTGGGCCTGCTTGGGCTCGCGGCCTTTTTCTGGTCGCTCGG CAAGGGACAGTTCGACGATCTTGATGGCGCCGCGCTGCGCATCTTCGTCGAAGAGGAAGAGGAGCGCGCGCCATGA
Upstream 100 bases:
>100_bases CCTTCATGGGGCTGGTCACGCCGCTCGTCGCGGCGATCGCCATGTCGGGATCGTCGCTGATCGTCGTCGGCAATGCGCTG CGGCTGAAAAGGGCAATCCG
Downstream 100 bases:
>100_bases CACCGCGAAGGATTGCAGCGTTGCTCGCCCTGACCGCGCTGATGCAGCCGCCGGTCGCGGTCGAGGCGCGCGTGCTGGCC GTACCGTCGTGCGGCGGGGA
Product: cytochrome oxidase maturation protein, cbb3-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 51; Mature: 51
Protein sequence:
>51_residues MNGLALLIPIALGLGLLGLAAFFWSLGKGQFDDLDGAALRIFVEEEEERAP
Sequences:
>Translated_51_residues MNGLALLIPIALGLGLLGLAAFFWSLGKGQFDDLDGAALRIFVEEEEERAP >Mature_51_residues MNGLALLIPIALGLGLLGLAAFFWSLGKGQFDDLDGAALRIFVEEEEERAP
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5459; Mature: 5459
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGLALLIPIALGLGLLGLAAFFWSLGKGQFDDLDGAALRIFVEEEEERAP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCC >Mature Secondary Structure MNGLALLIPIALGLGLLGLAAFFWSLGKGQFDDLDGAALRIFVEEEEERAP CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA