| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is wecB [H]
Identifier: 103487075
GI number: 103487075
Start: 1665926
End: 1667050
Strand: Direct
Name: wecB [H]
Synonym: Sala_1590
Alternate gene names: 103487075
Gene position: 1665926-1667050 (Clockwise)
Preceding gene: 103487055
Following gene: 103487076
Centisome position: 49.8
GC content: 65.69
Gene sequence:
>1125_bases GTGACCGATCATATCGTCATTGCTTTCGGCACTCGCCCGGAAGCGATCAAAATGTTCCCGGTCGTTCGGGCGCTGGCGGC GCGCGATGACGTTCGGGTCAGCGTCTGCGTCACCGCGCAGCATCGCGAGATGCTCGACCAGGTGCTCGAAATCGCGCGGA TCACACCCGATATCGACCTTGACGTCATGACACCCGACCAGTCGCTCGATGCGCTGCTCGCGCGGCTCGTCACCGGTCTG GGCGAAGCCTTCGATGCCGAAAAGCCCGACCGCATCCTCGTCCACGGCGACACGCTGACGACAATGGCGGCGACGCTGGC CGCCTATTTCCGCAAGATTCCGGTCGGGCATGTCGAGGCGGGGCTGCGCAGCGGCAATATCTATCACCCCTGGCCCGAAG AGGTGAACCGCAAGGTGACGGGCGCCGTCGCCGACCTGCATTTCGCGCCGACCGAAACCGCCGCGGCGGCGCTGCGCGCC GAAAATGTGCCTGCCGAGCGCATTCACGTCACCGGCAACACCGTGATCGATGCGCTGCTCGCAACGCAGGCGCGGATCGA GGAGGAGCCATCGCTGGCCGCGGGGCTCGACCCGCTCGCCCGCCGCTTTGCGGGCAAACGCATCATCGCCGTCACCTCGC ACCGGCGCGAGAATTTCGGCGACGGCATGAAAGCCATTGCCGAAGCGATCGCCGGGATCGCCGCACGTCCTGACGTGGCG GTGATTTTCCCGGTTCATCCCAACCCGCATGTCCGCAGCGCGATGGAGCCGATCCTCGGCGCGCTCCCCAATGTCGCGCT GATCGATCCGCTCGATTATCCGCATTTCGTTCGGCTGCTCGCGCTGAGCACGCTGGTGCTCACCGACAGCGGCGGGGTGC AGGAGGAAGCGCCCTCGCTCGGCAAGCCGGTGCTCGTGATGCGCGAGACGACCGAGCGGCCCGAAGGCATCGAGGCGGGC ACCGCACGGCTCGTCGGCACCGACAAAAATCGCATCGTTTCGGAAATTTTCAGCCTTTTGGACGATGAAGGCGCCTATAA CGCCATGGCGCGCGCGCATAATCCCTTCGGGGACGGCCGCGCCGCGGAACGAATAGCGGAGATTGTTGCGCGTGCCCATC GATAG
Upstream 100 bases:
>100_bases AAAGAATGATCGCGTCCATCCAAGGTTAGGACAACGGCAACCCTTTGGATATATAAGGCTGAGCTTGCCTTTTTCAACCG GATTTCAGGATCGTAGCGAC
Downstream 100 bases:
>100_bases CGACCAGAATGTTACCGTCCTCGGTCTGGGCTATATCGGCCTGCCCACCGCGGCGTTGATCGCGCGGTCGGGCAGCAAGG TCACGGGCGTCGATGTCAGC
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTDHIVIAFGTRPEAIKMFPVVRALAARDDVRVSVCVTAQHREMLDQVLEIARITPDIDLDVMTPDQSLDALLARLVTGL GEAFDAEKPDRILVHGDTLTTMAATLAAYFRKIPVGHVEAGLRSGNIYHPWPEEVNRKVTGAVADLHFAPTETAAAALRA ENVPAERIHVTGNTVIDALLATQARIEEEPSLAAGLDPLARRFAGKRIIAVTSHRRENFGDGMKAIAEAIAGIAARPDVA VIFPVHPNPHVRSAMEPILGALPNVALIDPLDYPHFVRLLALSTLVLTDSGGVQEEAPSLGKPVLVMRETTERPEGIEAG TARLVGTDKNRIVSEIFSLLDDEGAYNAMARAHNPFGDGRAAERIAEIVARAHR
Sequences:
>Translated_374_residues MTDHIVIAFGTRPEAIKMFPVVRALAARDDVRVSVCVTAQHREMLDQVLEIARITPDIDLDVMTPDQSLDALLARLVTGL GEAFDAEKPDRILVHGDTLTTMAATLAAYFRKIPVGHVEAGLRSGNIYHPWPEEVNRKVTGAVADLHFAPTETAAAALRA ENVPAERIHVTGNTVIDALLATQARIEEEPSLAAGLDPLARRFAGKRIIAVTSHRRENFGDGMKAIAEAIAGIAARPDVA VIFPVHPNPHVRSAMEPILGALPNVALIDPLDYPHFVRLLALSTLVLTDSGGVQEEAPSLGKPVLVMRETTERPEGIEAG TARLVGTDKNRIVSEIFSLLDDEGAYNAMARAHNPFGDGRAAERIAEIVARAHR >Mature_373_residues TDHIVIAFGTRPEAIKMFPVVRALAARDDVRVSVCVTAQHREMLDQVLEIARITPDIDLDVMTPDQSLDALLARLVTGLG EAFDAEKPDRILVHGDTLTTMAATLAAYFRKIPVGHVEAGLRSGNIYHPWPEEVNRKVTGAVADLHFAPTETAAAALRAE NVPAERIHVTGNTVIDALLATQARIEEEPSLAAGLDPLARRFAGKRIIAVTSHRRENFGDGMKAIAEAIAGIAARPDVAV IFPVHPNPHVRSAMEPILGALPNVALIDPLDYPHFVRLLALSTLVLTDSGGVQEEAPSLGKPVLVMRETTERPEGIEAGT ARLVGTDKNRIVSEIFSLLDDEGAYNAMARAHNPFGDGRAAERIAEIVARAHR
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=371, Percent_Identity=54.9865229110512, Blast_Score=386, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 40352; Mature: 40221
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDHIVIAFGTRPEAIKMFPVVRALAARDDVRVSVCVTAQHREMLDQVLEIARITPDIDL CCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCE DVMTPDQSLDALLARLVTGLGEAFDAEKPDRILVHGDTLTTMAATLAAYFRKIPVGHVEA EEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHH GLRSGNIYHPWPEEVNRKVTGAVADLHFAPTETAAAALRAENVPAERIHVTGNTVIDALL CCCCCCCCCCCHHHHCCHHHHHHHHEECCCCHHHHHHHHHCCCCHHEEEECCHHHHHHHH ATQARIEEEPSLAAGLDPLARRFAGKRIIAVTSHRRENFGDGMKAIAEAIAGIAARPDVA HHHHHHCCCCCHHHCCCHHHHHHCCCEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCEE VIFPVHPNPHVRSAMEPILGALPNVALIDPLDYPHFVRLLALSTLVLTDSGGVQEEAPSL EEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCC GKPVLVMRETTERPEGIEAGTARLVGTDKNRIVSEIFSLLDDEGAYNAMARAHNPFGDGR CCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCH AAERIAEIVARAHR HHHHHHHHHHHHCC >Mature Secondary Structure TDHIVIAFGTRPEAIKMFPVVRALAARDDVRVSVCVTAQHREMLDQVLEIARITPDIDL CCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCE DVMTPDQSLDALLARLVTGLGEAFDAEKPDRILVHGDTLTTMAATLAAYFRKIPVGHVEA EEECCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHH GLRSGNIYHPWPEEVNRKVTGAVADLHFAPTETAAAALRAENVPAERIHVTGNTVIDALL CCCCCCCCCCCHHHHCCHHHHHHHHEECCCCHHHHHHHHHCCCCHHEEEECCHHHHHHHH ATQARIEEEPSLAAGLDPLARRFAGKRIIAVTSHRRENFGDGMKAIAEAIAGIAARPDVA HHHHHHCCCCCHHHCCCHHHHHHCCCEEEEEECCCHHCCCHHHHHHHHHHHHHCCCCCEE VIFPVHPNPHVRSAMEPILGALPNVALIDPLDYPHFVRLLALSTLVLTDSGGVQEEAPSL EEEECCCCCHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHEEECCCCCCCCCCCC GKPVLVMRETTERPEGIEAGTARLVGTDKNRIVSEIFSLLDDEGAYNAMARAHNPFGDGR CCCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCH AAERIAEIVARAHR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]