| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is kup
Identifier: 103486997
GI number: 103486997
Start: 1578637
End: 1580598
Strand: Reverse
Name: kup
Synonym: Sala_1512
Alternate gene names: 103486997
Gene position: 1580598-1578637 (Counterclockwise)
Preceding gene: 103486998
Following gene: 103486996
Centisome position: 47.25
GC content: 61.93
Gene sequence:
>1962_bases ATGACTGCTGAGTCGCAACGGGCGGCCGAGGGCGTGGCAACCGCCATCGAAGCCGCCGCCGAAACCGGCCATCACGGCCA TGGCCCTCATGGTGACGGCAAGCTGAAGCTTGCCGTCGGTGCGGTCGGCGTCGTCTTCGGCGACATCGGTACCAGCCCGC TCTATGCGTTCCGCGAAACCTTTGCGGGGCATCATCCGATCGAGCCCGACCGGCTGCATATCTATGGTGTGCTGAGCCTC GTTTTCTGGTCGATGATGCTCGTCGTCACCTTCAAATATGTGATGACGATCATGCGCGCCGACAACAAGGGCGAGGGGGG CAGCCTCGCGCTGCTCGCGCTGATCAGCCGCTCGTCGGAAGGCAAGCGCTGGACCTGGCCGATCGTCCTTCTGGGCGTGT TTGCCACCGCCCTCTTCTATGGCGACAGCATGATTACCCCGGCGATGTCGGTGCTTTCGGCGACCGAAGGCCTGTCCTAT GTCGACAAGGGATTCGAACCCTATATCGTGCCGATCGCCCTGGGCATACTCATCGGCCTGTTCGCGATCCAGGCGCGCGG GACGGCGAAGGTCGGCGCGCTGTTCGGCCCGATCATGCTGCTCTATTTCCTGATGCTTGCAGGGCTTGGTATCCTGCATA TCGGCAATAATCCGTGGATCATCGTCGAGACGCTCAACCCGGTCAACGCCCTACGATTCTTTTACCTCGACGGTTTCACG GCCTTTATCGCGCTCGGCGCGGTCGTGCTCGCGGTGACCGGCGCGGAGGCGCTTTATGCCGACATGGGGCATTTCGGTCG CGGGCCGATCGGCCTCTCGTGGCTGAGTTTCGTGCTGCCCGCGTTGATGCTCAACTATATGGGACAGGGCGCGATGGTCC TTGCGGCCGAAGCGGGGCCGCGCACCGAACTGATTGCCGATCCCTTTTTCCAGATGATGCCGCAGTTTCTCGAACTGCCC GTCGTCATCCTCGCGCTGCTTGCGACGATCATCGCCAGCCAGGCGGTGATCTCGGGCGCCTTCTCGCTGACCCAGCAGGC GATCCAGCTCGGCTTCATGCCGCGCCTGCGGGTCGAGCACACCAGCGCGTCGGCGGCGGGGCAGATATACATTCCCATTG TCAACTGGGGGCTGATGGTCATGGTGATTCTGCTCGTCCTCGGCTTCGGCTCGTCGAGCAACCTTGCCGCGGCCTATGGC ATTGCCGTGACCGGGGCGATGTTCATCGATACCTGTTTGATGAGCGTCGTGCTCTTCACATTATGGAAATGGCCGGCATG GAAGGCGCTGCCGGTGCTCGCGGTCTTCTTCATCGTCGACATCGCCTATTTCGGCGCCAACCTGATCAAGGTGCCCGACG GCGGCTGGGTGCCGCTGGTGATCGGGCTCACCATCTTCACGCTGCTCACCACCTGGTCGCGCGGGCGCAAGCTGATGCAG GAGGAAATGGCCGAGGGTGCGATGCCGATCCCGATTTTCGTGAAGTCGGCTGCGAACAGCGCGACGCGCGTGCCTGGCAC CGCGGTCTTCATGACATCGAGCAGCGACGGCGTGCCGCACGCGCTGCTCCACAACCTCAAGCACAACAAGGTGCTGCACG AGCGCATCATCCTGCTGACGATCAAGATTGCCGACGTGCCGTTCGTCCCCGAAAGCAAGCTTTGCCAGCTCGAAGATCTG GGGCAGGGATTCCACCGGTTGGTGCTCAACTATGGTTTCATGCAGCCGATCGACGTGCCCGAGGCGCTGATGCGGGTGAC GAGCTGTGGCGGTGAGTTCAAGATGCTGGAAACCAGCTTTTTCCTGTCGCGCCAGACCCTGATTGCGGCGAAGAAACCGG GGATGCCGATCTGGCGCGAAAAGCTTTTCGCGTGGATGCTGCGCAATTCGGAAAGCGCGATGGAATATTTCCGTCTGCCA AGTAATCGGGTGGTCGAACTGGGTAGCCAGGTCGCGATCTGA
Upstream 100 bases:
>100_bases GCCGACGCCAGCGGCACCTGCGGGCCCGGCCGACGAAACCGTAGCGAGCGTCCCGAATTGAAACCTGTTCCAAAATCGCA GGCTCGTCTAAAGGCGCGCG
Downstream 100 bases:
>100_bases CCGGCGCGATCGATTTTCGGGCAGCAGGCGGTCGCAGTGGTGGAGAGCAGCCAACAAACGCGCCTGATATCCTCATCATG ATGTCGCCGCAGTGATGGTC
Product: K+ potassium transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 653; Mature: 652
Protein sequence:
>653_residues MTAESQRAAEGVATAIEAAAETGHHGHGPHGDGKLKLAVGAVGVVFGDIGTSPLYAFRETFAGHHPIEPDRLHIYGVLSL VFWSMMLVVTFKYVMTIMRADNKGEGGSLALLALISRSSEGKRWTWPIVLLGVFATALFYGDSMITPAMSVLSATEGLSY VDKGFEPYIVPIALGILIGLFAIQARGTAKVGALFGPIMLLYFLMLAGLGILHIGNNPWIIVETLNPVNALRFFYLDGFT AFIALGAVVLAVTGAEALYADMGHFGRGPIGLSWLSFVLPALMLNYMGQGAMVLAAEAGPRTELIADPFFQMMPQFLELP VVILALLATIIASQAVISGAFSLTQQAIQLGFMPRLRVEHTSASAAGQIYIPIVNWGLMVMVILLVLGFGSSSNLAAAYG IAVTGAMFIDTCLMSVVLFTLWKWPAWKALPVLAVFFIVDIAYFGANLIKVPDGGWVPLVIGLTIFTLLTTWSRGRKLMQ EEMAEGAMPIPIFVKSAANSATRVPGTAVFMTSSSDGVPHALLHNLKHNKVLHERIILLTIKIADVPFVPESKLCQLEDL GQGFHRLVLNYGFMQPIDVPEALMRVTSCGGEFKMLETSFFLSRQTLIAAKKPGMPIWREKLFAWMLRNSESAMEYFRLP SNRVVELGSQVAI
Sequences:
>Translated_653_residues MTAESQRAAEGVATAIEAAAETGHHGHGPHGDGKLKLAVGAVGVVFGDIGTSPLYAFRETFAGHHPIEPDRLHIYGVLSL VFWSMMLVVTFKYVMTIMRADNKGEGGSLALLALISRSSEGKRWTWPIVLLGVFATALFYGDSMITPAMSVLSATEGLSY VDKGFEPYIVPIALGILIGLFAIQARGTAKVGALFGPIMLLYFLMLAGLGILHIGNNPWIIVETLNPVNALRFFYLDGFT AFIALGAVVLAVTGAEALYADMGHFGRGPIGLSWLSFVLPALMLNYMGQGAMVLAAEAGPRTELIADPFFQMMPQFLELP VVILALLATIIASQAVISGAFSLTQQAIQLGFMPRLRVEHTSASAAGQIYIPIVNWGLMVMVILLVLGFGSSSNLAAAYG IAVTGAMFIDTCLMSVVLFTLWKWPAWKALPVLAVFFIVDIAYFGANLIKVPDGGWVPLVIGLTIFTLLTTWSRGRKLMQ EEMAEGAMPIPIFVKSAANSATRVPGTAVFMTSSSDGVPHALLHNLKHNKVLHERIILLTIKIADVPFVPESKLCQLEDL GQGFHRLVLNYGFMQPIDVPEALMRVTSCGGEFKMLETSFFLSRQTLIAAKKPGMPIWREKLFAWMLRNSESAMEYFRLP SNRVVELGSQVAI >Mature_652_residues TAESQRAAEGVATAIEAAAETGHHGHGPHGDGKLKLAVGAVGVVFGDIGTSPLYAFRETFAGHHPIEPDRLHIYGVLSLV FWSMMLVVTFKYVMTIMRADNKGEGGSLALLALISRSSEGKRWTWPIVLLGVFATALFYGDSMITPAMSVLSATEGLSYV DKGFEPYIVPIALGILIGLFAIQARGTAKVGALFGPIMLLYFLMLAGLGILHIGNNPWIIVETLNPVNALRFFYLDGFTA FIALGAVVLAVTGAEALYADMGHFGRGPIGLSWLSFVLPALMLNYMGQGAMVLAAEAGPRTELIADPFFQMMPQFLELPV VILALLATIIASQAVISGAFSLTQQAIQLGFMPRLRVEHTSASAAGQIYIPIVNWGLMVMVILLVLGFGSSSNLAAAYGI AVTGAMFIDTCLMSVVLFTLWKWPAWKALPVLAVFFIVDIAYFGANLIKVPDGGWVPLVIGLTIFTLLTTWSRGRKLMQE EMAEGAMPIPIFVKSAANSATRVPGTAVFMTSSSDGVPHALLHNLKHNKVLHERIILLTIKIADVPFVPESKLCQLEDLG QGFHRLVLNYGFMQPIDVPEALMRVTSCGGEFKMLETSFFLSRQTLIAAKKPGMPIWREKLFAWMLRNSESAMEYFRLPS NRVVELGSQVAI
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=626, Percent_Identity=47.1246006389776, Blast_Score=547, Evalue=1e-157,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP_SPHAL (Q1GSZ7)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616558.1 - GeneID: 4080025 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1512 - NMPDR: fig|317655.9.peg.1445 - HOGENOM: HBG351154 - OMA: ETINIPR - ProtClustDB: CLSK835383 - BioCyc: SALA317655:SALA_1512-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 70743; Mature: 70611
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1289bb9c)-; HASH(0x1115265c)-; HASH(0x12bb4e3c)-; HASH(0x12232ef0)-; HASH(0x12ae680c)-; HASH(0x111524c4)-; HASH(0x114a65a4)-; HASH(0x12aee2b0)-; HASH(0x12ad4c54)-; HASH(0x11c4b268)-; HASH(0x12bb4e6c)-; HASH(0x12af097c)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAESQRAAEGVATAIEAAAETGHHGHGPHGDGKLKLAVGAVGVVFGDIGTSPLYAFRET CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCHHHHHHHH FAGHHPIEPDRLHIYGVLSLVFWSMMLVVTFKYVMTIMRADNKGEGGSLALLALISRSSE HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC GKRWTWPIVLLGVFATALFYGDSMITPAMSVLSATEGLSYVDKGFEPYIVPIALGILIGL CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHH FAIQARGTAKVGALFGPIMLLYFLMLAGLGILHIGNNPWIIVETLNPVNALRFFYLDGFT HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHH AFIALGAVVLAVTGAEALYADMGHFGRGPIGLSWLSFVLPALMLNYMGQGAMVLAAEAGP HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC RTELIADPFFQMMPQFLELPVVILALLATIIASQAVISGAFSLTQQAIQLGFMPRLRVEH CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC TSASAAGQIYIPIVNWGLMVMVILLVLGFGSSSNLAAAYGIAVTGAMFIDTCLMSVVLFT CCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LWKWPAWKALPVLAVFFIVDIAYFGANLIKVPDGGWVPLVIGLTIFTLLTTWSRGRKLMQ HHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EEMAEGAMPIPIFVKSAANSATRVPGTAVFMTSSSDGVPHALLHNLKHNKVLHERIILLT HHHHCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEE IKIADVPFVPESKLCQLEDLGQGFHRLVLNYGFMQPIDVPEALMRVTSCGGEFKMLETSF EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEHHHH FLSRQTLIAAKKPGMPIWREKLFAWMLRNSESAMEYFRLPSNRVVELGSQVAI HHHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCCCH >Mature Secondary Structure TAESQRAAEGVATAIEAAAETGHHGHGPHGDGKLKLAVGAVGVVFGDIGTSPLYAFRET CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHHHHHCCCCCHHHHHHHH FAGHHPIEPDRLHIYGVLSLVFWSMMLVVTFKYVMTIMRADNKGEGGSLALLALISRSSE HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCC GKRWTWPIVLLGVFATALFYGDSMITPAMSVLSATEGLSYVDKGFEPYIVPIALGILIGL CCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHH FAIQARGTAKVGALFGPIMLLYFLMLAGLGILHIGNNPWIIVETLNPVNALRFFYLDGFT HHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCHHHHHHHHHHHHH AFIALGAVVLAVTGAEALYADMGHFGRGPIGLSWLSFVLPALMLNYMGQGAMVLAAEAGP HHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCC RTELIADPFFQMMPQFLELPVVILALLATIIASQAVISGAFSLTQQAIQLGFMPRLRVEH CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC TSASAAGQIYIPIVNWGLMVMVILLVLGFGSSSNLAAAYGIAVTGAMFIDTCLMSVVLFT CCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LWKWPAWKALPVLAVFFIVDIAYFGANLIKVPDGGWVPLVIGLTIFTLLTTWSRGRKLMQ HHCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHH EEMAEGAMPIPIFVKSAANSATRVPGTAVFMTSSSDGVPHALLHNLKHNKVLHERIILLT HHHHCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEEEE IKIADVPFVPESKLCQLEDLGQGFHRLVLNYGFMQPIDVPEALMRVTSCGGEFKMLETSF EEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEEHHHH FLSRQTLIAAKKPGMPIWREKLFAWMLRNSESAMEYFRLPSNRVVELGSQVAI HHHHHHHHEECCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA