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The map label for this gene is ygiS [C]

Identifier: 103486985

GI number: 103486985

Start: 1563081

End: 1564586

Strand: Direct

Name: ygiS [C]

Synonym: Sala_1500

Alternate gene names: 103486985

Gene position: 1563081-1564586 (Clockwise)

Preceding gene: 103486981

Following gene: 103486986

Centisome position: 46.73

GC content: 68.92

Gene sequence:

>1506_bases
ATGACAGCAATGGGCCGCAACACACGCCGCGCGATGGCGACGGCGGCCGCGACGGGCCTGATGCTGGCGCTGTCCGGTTG
TGACCTTTTTGGCGAGCGCGGCCCGGTTCGCGTCGCCGCGATCGGTGAGCTCAACCCGATGGCCAACCCCGCGCGCGGCG
AGCTTTCGACCGCCAATGCGGCGCTGCTCGACGCGACCTCGCAAGGGCTGGTCAGTTACGACGGGGAGGGCCAGATCGAC
ACCGGGCTGGCCGACCGCTGGACAGTCACCACCGACGGGCGCAGCTATATCTTCCGCATCACCGAAGCGAAATGGAGCAA
CGGCAGCAAGGTGACCGCCGAGACGGTGGCCTCTATCCTTCGCTCCTACCTCGCGCCTGCGAGCCGCCATGTGCTGAAGG
ACGATTTTCCCGAGGTCGAAACGATCAAGGCGATGACCGATACGGTCATCGAAATCCGCCTGTCGGTGCCGCAACCCGCT
CTGCTCGAACTGCTCGCGCAACCGTCGATGGCGATCGTCAACCGGGGCATGGGCTGGGGACCGATGCGTGCGCGCAAGGT
CGGGCGGGCGATGCTGCTGTCACCGGTCCCCGATCCGCTCGCCGAAGATCCGGAGGCGGCCGAAGCCGCGGCGAGTGATC
CCGCCGCGTCGATCGAGCTGGTCGGCACGTCGCCGCAAGGGGCGCTTGCGCGCTTCAAGAACGGCTATGCCGACGGGGTG
ATCGGCGGGCGCTTTTCGACCCTTCCCTATTTCGTCGCCTCGAACATCGGCCGCTCGCGGCTGGTGGTCGATCCCGTGCC
CGGCCTGTTCGGGCTGGCCTTTGTCCGCGCCGAAGGTTTTCTGGCGACCGACACCAATCGTGACGCGCTGGTGCGCGCCA
TCCGGCGCGAGCGGCTGGTCGAAGCCTTCGGGCTGACCGAGTGGCAGCCGCAGGTCACGCTGCGCCCGTTGCTCTATACG
CGCGACGGCGGCCCCGCGCCGCTGCTGCCCGCGTGGGCGGATTATGACGAGGCGTCGCGGCTGGCGCAGGCGCGGCGCGT
CGTCGAGGCCTGGCGCAGCGCCGGACGCGAAATCGAACCGCTGCGCATCGCCGTCCCCGATTCGCCGGGCGGCCGCATCC
TTTTCGCCTATGTTGCCGCCGATCTGGCTGCGATCGGCGTTCCCAGCCGCCGCGTCTCAATGTCGTCGAACGCCGATTTG
CGACTGATCGACGAGGTCGCGCCGAACGACGATCCGCTCTGGGCGCTGCGCCGCCTGTCGTGTCGCCGCGACACGCTGTG
CAACCGCGAGGCGCAGGATCTGATCGATCAGGCGACGATCAATATCGACGCGGGCCAGCGCGCCCGGCAGATCGGCGACG
CCGAGGCGGTGCTCGCGCGTTACGCCCCCTTCATCCCGCTCGCGACGCCGCTGCGCTGGTCGGTCGCGTCGCAGCGCCTG
ACCGGGCTGCGCGCCAACGGCCGCGCGCAGCACCCATTGAATCATCTGATTGCCATACCCAACTAG

Upstream 100 bases:

>100_bases
CCGCCGCCCGTCATCTCCTGCCCATTATTCGATATACCCCTATTCCGCTTTGGCAGCACATGGTTATGATTGGCTTACAC
GATTTGAGGGACGTTCCGGA

Downstream 100 bases:

>100_bases
GGTCAGGACCCATTAATTACCCGTTCGAGGTTTGAGGCGATTTTGCTCAGGGCGAGGAGGAAAGGCGCGGGAATATGAAT
ATATTTCAAGACTTTTCGAC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MTAMGRNTRRAMATAAATGLMLALSGCDLFGERGPVRVAAIGELNPMANPARGELSTANAALLDATSQGLVSYDGEGQID
TGLADRWTVTTDGRSYIFRITEAKWSNGSKVTAETVASILRSYLAPASRHVLKDDFPEVETIKAMTDTVIEIRLSVPQPA
LLELLAQPSMAIVNRGMGWGPMRARKVGRAMLLSPVPDPLAEDPEAAEAAASDPAASIELVGTSPQGALARFKNGYADGV
IGGRFSTLPYFVASNIGRSRLVVDPVPGLFGLAFVRAEGFLATDTNRDALVRAIRRERLVEAFGLTEWQPQVTLRPLLYT
RDGGPAPLLPAWADYDEASRLAQARRVVEAWRSAGREIEPLRIAVPDSPGGRILFAYVAADLAAIGVPSRRVSMSSNADL
RLIDEVAPNDDPLWALRRLSCRRDTLCNREAQDLIDQATINIDAGQRARQIGDAEAVLARYAPFIPLATPLRWSVASQRL
TGLRANGRAQHPLNHLIAIPN

Sequences:

>Translated_501_residues
MTAMGRNTRRAMATAAATGLMLALSGCDLFGERGPVRVAAIGELNPMANPARGELSTANAALLDATSQGLVSYDGEGQID
TGLADRWTVTTDGRSYIFRITEAKWSNGSKVTAETVASILRSYLAPASRHVLKDDFPEVETIKAMTDTVIEIRLSVPQPA
LLELLAQPSMAIVNRGMGWGPMRARKVGRAMLLSPVPDPLAEDPEAAEAAASDPAASIELVGTSPQGALARFKNGYADGV
IGGRFSTLPYFVASNIGRSRLVVDPVPGLFGLAFVRAEGFLATDTNRDALVRAIRRERLVEAFGLTEWQPQVTLRPLLYT
RDGGPAPLLPAWADYDEASRLAQARRVVEAWRSAGREIEPLRIAVPDSPGGRILFAYVAADLAAIGVPSRRVSMSSNADL
RLIDEVAPNDDPLWALRRLSCRRDTLCNREAQDLIDQATINIDAGQRARQIGDAEAVLARYAPFIPLATPLRWSVASQRL
TGLRANGRAQHPLNHLIAIPN
>Mature_500_residues
TAMGRNTRRAMATAAATGLMLALSGCDLFGERGPVRVAAIGELNPMANPARGELSTANAALLDATSQGLVSYDGEGQIDT
GLADRWTVTTDGRSYIFRITEAKWSNGSKVTAETVASILRSYLAPASRHVLKDDFPEVETIKAMTDTVIEIRLSVPQPAL
LELLAQPSMAIVNRGMGWGPMRARKVGRAMLLSPVPDPLAEDPEAAEAAASDPAASIELVGTSPQGALARFKNGYADGVI
GGRFSTLPYFVASNIGRSRLVVDPVPGLFGLAFVRAEGFLATDTNRDALVRAIRRERLVEAFGLTEWQPQVTLRPLLYTR
DGGPAPLLPAWADYDEASRLAQARRVVEAWRSAGREIEPLRIAVPDSPGGRILFAYVAADLAAIGVPSRRVSMSSNADLR
LIDEVAPNDDPLWALRRLSCRRDTLCNREAQDLIDQATINIDAGQRARQIGDAEAVLARYAPFIPLATPLRWSVASQRLT
GLRANGRAQHPLNHLIAIPN

Specific function: Probably Part Of A Binding-Protein-Dependent Transport System. [C]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53953; Mature: 53822

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMGRNTRRAMATAAATGLMLALSGCDLFGERGPVRVAAIGELNPMANPARGELSTANA
CCCCCCCHHHHHHHHHHHHHHHHEECCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ALLDATSQGLVSYDGEGQIDTGLADRWTVTTDGRSYIFRITEAKWSNGSKVTAETVASIL
CEEECCCCCCEEECCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEECHHHHHHHH
RSYLAPASRHVLKDDFPEVETIKAMTDTVIEIRLSVPQPALLELLAQPSMAIVNRGMGWG
HHHHCHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHCCCCHHHHHCCCCCC
PMRARKVGRAMLLSPVPDPLAEDPEAAEAAASDPAASIELVGTSPQGALARFKNGYADGV
CHHHHHHCHHEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCC
IGGRFSTLPYFVASNIGRSRLVVDPVPGLFGLAFVRAEGFLATDTNRDALVRAIRRERLV
CCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH
EAFGLTEWQPQVTLRPLLYTRDGGPAPLLPAWADYDEASRLAQARRVVEAWRSAGREIEP
HHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LRIAVPDSPGGRILFAYVAADLAAIGVPSRRVSMSSNADLRLIDEVAPNDDPLWALRRLS
EEEECCCCCCCEEEHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCCHHHHHHHHH
CRRDTLCNREAQDLIDQATINIDAGQRARQIGDAEAVLARYAPFIPLATPLRWSVASQRL
HHHHHHCCCHHHHHHHHHEEEECCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TGLRANGRAQHPLNHLIAIPN
HCCCCCCCCCCCCCCEEECCC
>Mature Secondary Structure 
TAMGRNTRRAMATAAATGLMLALSGCDLFGERGPVRVAAIGELNPMANPARGELSTANA
CCCCCCHHHHHHHHHHHHHHHHEECCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCC
ALLDATSQGLVSYDGEGQIDTGLADRWTVTTDGRSYIFRITEAKWSNGSKVTAETVASIL
CEEECCCCCCEEECCCCCCCCCCCCCEEEEECCCEEEEEEEECCCCCCCEECHHHHHHHH
RSYLAPASRHVLKDDFPEVETIKAMTDTVIEIRLSVPQPALLELLAQPSMAIVNRGMGWG
HHHHCHHHHHHHHCCCCCHHHHHHHHHEEEEEEECCCCHHHHHHHCCCCHHHHHCCCCCC
PMRARKVGRAMLLSPVPDPLAEDPEAAEAAASDPAASIELVGTSPQGALARFKNGYADGV
CHHHHHHCHHEEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCC
IGGRFSTLPYFVASNIGRSRLVVDPVPGLFGLAFVRAEGFLATDTNRDALVRAIRRERLV
CCCCHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHH
EAFGLTEWQPQVTLRPLLYTRDGGPAPLLPAWADYDEASRLAQARRVVEAWRSAGREIEP
HHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
LRIAVPDSPGGRILFAYVAADLAAIGVPSRRVSMSSNADLRLIDEVAPNDDPLWALRRLS
EEEECCCCCCCEEEHHHHHHHHHHHCCCCCEEECCCCCCEEEEECCCCCCCHHHHHHHHH
CRRDTLCNREAQDLIDQATINIDAGQRARQIGDAEAVLARYAPFIPLATPLRWSVASQRL
HHHHHHCCCHHHHHHHHHEEEECCCHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TGLRANGRAQHPLNHLIAIPN
HCCCCCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA