| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ilvH [H]
Identifier: 103486956
GI number: 103486956
Start: 1530762
End: 1531280
Strand: Direct
Name: ilvH [H]
Synonym: Sala_1471
Alternate gene names: 103486956
Gene position: 1530762-1531280 (Clockwise)
Preceding gene: 103486955
Following gene: 103486957
Centisome position: 45.76
GC content: 63.01
Gene sequence:
>519_bases ATGAAAATCAAGACCGAAGCCGGCGAGCGCCATGTGCTCGCCATCACCGTCGACAACGAAGCCGGCGTGCTCGCCAAGAT CACCGGGCTGTTCACCGCGCGCGGTTATAATATCGAAAGCCTCACCGTGGCCGACATCAGTTCGGATCATGCGCTGTCGC GCATCACGATCGTCACCAACGGCCCGCCGCCGATCATCGACCAGATCATCGCGCAGCTCGACCGGCTGGTCCCGGTCCAC AAGGTTGTCGACCTCACCGATGCGGGCGAAACGCATGTCGAGCGCGAAATCGCGCTCGTCAAAGTCGCGGGCACCGGCGA CAAAAGGATCGAGGCGCTGCGCATGGCCGATGTCTTTCGCGCCAAGGTTGTCGATACGACGCTGACCAGCTTCATCTTTG AAATCACCGGGACGAGCGACAAGGTCGACCGCTTCATCGCGCTGATGCGCGAATGCGGGCTGGTCGAGGTCGGTCGCACC GGCGTCGTTGCCATCGCACGCGGCCCGGAGGCGCTCTGA
Upstream 100 bases:
>100_bases GAAGCATGGTGGAGGGGCACGCGGTGTCAAGCGCGGCGGATGCGGGCCCGTACCCCTCCACCAGCTTCGCCGGTCCCCCT CCCCGTGCCGGGGAGGAACA
Downstream 100 bases:
>100_bases GTTTTAACAGGAATGACGGTTCAACCTTCGTCACCCCGGACTTGATCCGGGGTCCATGGATGCCGGATCACGTCCGGCAT GACGAATGAAAACAAGGGAA
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKIKTEAGERHVLAITVDNEAGVLAKITGLFTARGYNIESLTVADISSDHALSRITIVTNGPPPIIDQIIAQLDRLVPVH KVVDLTDAGETHVEREIALVKVAGTGDKRIEALRMADVFRAKVVDTTLTSFIFEITGTSDKVDRFIALMRECGLVEVGRT GVVAIARGPEAL
Sequences:
>Translated_172_residues MKIKTEAGERHVLAITVDNEAGVLAKITGLFTARGYNIESLTVADISSDHALSRITIVTNGPPPIIDQIIAQLDRLVPVH KVVDLTDAGETHVEREIALVKVAGTGDKRIEALRMADVFRAKVVDTTLTSFIFEITGTSDKVDRFIALMRECGLVEVGRT GVVAIARGPEAL >Mature_172_residues MKIKTEAGERHVLAITVDNEAGVLAKITGLFTARGYNIESLTVADISSDHALSRITIVTNGPPPIIDQIIAQLDRLVPVH KVVDLTDAGETHVEREIALVKVAGTGDKRIEALRMADVFRAKVVDTTLTSFIFEITGTSDKVDRFIALMRECGLVEVGRT GVVAIARGPEAL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=160, Percent_Identity=44.375, Blast_Score=132, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6319837, Length=210, Percent_Identity=28.0952380952381, Blast_Score=83, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 18529; Mature: 18529
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTEAGERHVLAITVDNEAGVLAKITGLFTARGYNIESLTVADISSDHALSRITIVTN CCCCCCCCCEEEEEEEECCCCCEEEEEEEHHEECCCCCCEEEEEECCCCCCEEEEEEEEC GPPPIIDQIIAQLDRLVPVHKVVDLTDAGETHVEREIALVKVAGTGDKRIEALRMADVFR CCCHHHHHHHHHHHHCCCHHHHEECCCCCCHHHEEEEEEEEEECCCCHHHHHHHHHHHHH AKVVDTTLTSFIFEITGTSDKVDRFIALMRECGLVEVGRTGVVAIARGPEAL HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCC >Mature Secondary Structure MKIKTEAGERHVLAITVDNEAGVLAKITGLFTARGYNIESLTVADISSDHALSRITIVTN CCCCCCCCCEEEEEEEECCCCCEEEEEEEHHEECCCCCCEEEEEECCCCCCEEEEEEEEC GPPPIIDQIIAQLDRLVPVHKVVDLTDAGETHVEREIALVKVAGTGDKRIEALRMADVFR CCCHHHHHHHHHHHHCCCHHHHEECCCCCCHHHEEEEEEEEEECCCCHHHHHHHHHHHHH AKVVDTTLTSFIFEITGTSDKVDRFIALMRECGLVEVGRTGVVAIARGPEAL HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCEEEECCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]