| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is ilvI [H]
Identifier: 103486955
GI number: 103486955
Start: 1528868
End: 1530613
Strand: Direct
Name: ilvI [H]
Synonym: Sala_1470
Alternate gene names: 103486955
Gene position: 1528868-1530613 (Clockwise)
Preceding gene: 103486954
Following gene: 103486956
Centisome position: 45.7
GC content: 64.95
Gene sequence:
>1746_bases ATGAGCGGTGCCGACATGGTGGTTCAGGCGCTGGTCGACCTTGGCGTCGATACAGTGTTCGGCTATCCGGGCGGCGCGGT CCTTCCCATCTATGACGCGCTCTACAAGCACCCGACGATCAAGCATATTCTCGTCCGTCATGAACAGGCGGCGACGCATG CGGCGGAGGGTTATGCGCGCTCGACCGGCAAGCCGGGCGTCGTACTGGTCACCTCGGGCCCCGGCGCGACGAACGCCGTC ACTGGCATCACCGACGCCTTGCTCGATTCGATTCCGATGGTCGTGCTCACCGGCCAGGTTCCGACGACGCTGATCGGCAC CGACGCCTTTCAGGAATGCGACACGGTCGGCATCACGCGCCATTGCACCAAGCATAATTATCTGGTGATGGATCCCGACC GCCTCGGCCCCGTCATGCACGAGGCGTTCCATATCGCGACGCACGGCCGCCCCGGCCCGGTGGTGATCGACATTCCGAAA AATGTTCAGGTCGCGACCGGCACCTATTCGGTGCCCGAGTTCATCCAGCACAACAGCTATCGCCCGCAAGTCGAACCCGA CGCCGACGCGATCGGTCAGGCGATCGACATGATCGCTGCGGCCGAACGTCCGGTCTTCTACACCGGCGGCGGCGTGATCA ACGCCGGCCCCGATGCGAGCGCTGCCTTGCGCCAGCTCGTCGGCCTGACCGGCGCGCCGATCACCTCGACCTTGATGGGG CTCGGCGCCTTCCCCGCTGACGATCCCAAATGGCTCGGCATGCTCGGTATGCACGGCACCTATGAAGCCAATATGGCGAT GAACCGCGCCGACCTGATCGTCGCGGTCGGCGCGCGCTTCGACGACCGCGTGACCGGCCGCCTCGACGCCTTTTCGCCCG ATTCCAAAAAGATCCATATCGACATTGATCGCAGCTCGATCAACAAGATCGTCCCCGTCGACCTCGCGATCGTCGGCGAT GCCGGGCGCGCGCTCGCCGCGCTGATCGCCGCGTGGCAGGACAGGGGCCACAAGGCGCGCGACCTCGGCGAATGGTGGCG CCGCGTCGACGGCTGGCGCGCCACGCGCTGCCTCGACTTCCCCGAAAAAAAGGAGCCCGACGCCGACATCATGCCGCAGC GCGCGGTGAAGGCGCTGTTCGACGCGACGCGCGGGCGCGATCCGATCATCACCACCGAAGTCGGGCAGCACCAGATGTGG GCGGCGCAGCATTTCGGCTTCTCCGCCCCGAACCGCTGGCTGACCAGCGGCGGGCTCGGCACGATGGGTTATGGCTTCCC CGCCGCGGTCGGCGCGCAGATCGCGCACCCGAACCGCCTCGTCATCTGCATCGCGGGCGAAGCCAGCCTTCAGATGAACA TTCAGGAAATGGGCACGGTCAGCCAGTACCGCCTGCCGGTGAAGATATTCATCCTCAACAATGAATGGATGGGCATGGTC CGCCAGTGGCAGGAACTGACCTATGAAAGCCGCTATTCGAACAGCTATTCGGACAGCCTGCCCGATTTTGTGAAGCTCGC CGAAGCCTATGGCTGGACCGGATTACGGATCGACACGCTCGGCGAACTCGAAGGCGGCATCGCCCGGATGATCGAGACTC CGGGCCCGGTGATCGTCGACTGCCGCGTCGCCCAGCTCGCCAACTGCTTCCCGATGATCCCGAGCGGAGCGGCGCACACC GACATGATCCTCCAGCCGAACGACATCACCGGCACGATGGACGACGAAGCGAAAGCGCTGGTGTGA
Upstream 100 bases:
>100_bases CAGTGTTGACAAGATAGAATCATGCAACTATTGCCCGCAACCCTGTTGCAGCGCACAAGCGCTGCGTTTTTGTGTGCAAA GGAGTTTCGTCGTGACGGAA
Downstream 100 bases:
>100_bases TGGCGGCGAGCAACGCGATCCTCCCCCATCGGGGGAGGGGGATCATGCGAAGCATGGTGGAGGGGCACGCGGTGTCAAGC GCGGCGGATGCGGGCCCGTA
Product: acetolactate synthase, large subunit, biosynthetic type
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MSGADMVVQALVDLGVDTVFGYPGGAVLPIYDALYKHPTIKHILVRHEQAATHAAEGYARSTGKPGVVLVTSGPGATNAV TGITDALLDSIPMVVLTGQVPTTLIGTDAFQECDTVGITRHCTKHNYLVMDPDRLGPVMHEAFHIATHGRPGPVVIDIPK NVQVATGTYSVPEFIQHNSYRPQVEPDADAIGQAIDMIAAAERPVFYTGGGVINAGPDASAALRQLVGLTGAPITSTLMG LGAFPADDPKWLGMLGMHGTYEANMAMNRADLIVAVGARFDDRVTGRLDAFSPDSKKIHIDIDRSSINKIVPVDLAIVGD AGRALAALIAAWQDRGHKARDLGEWWRRVDGWRATRCLDFPEKKEPDADIMPQRAVKALFDATRGRDPIITTEVGQHQMW AAQHFGFSAPNRWLTSGGLGTMGYGFPAAVGAQIAHPNRLVICIAGEASLQMNIQEMGTVSQYRLPVKIFILNNEWMGMV RQWQELTYESRYSNSYSDSLPDFVKLAEAYGWTGLRIDTLGELEGGIARMIETPGPVIVDCRVAQLANCFPMIPSGAAHT DMILQPNDITGTMDDEAKALV
Sequences:
>Translated_581_residues MSGADMVVQALVDLGVDTVFGYPGGAVLPIYDALYKHPTIKHILVRHEQAATHAAEGYARSTGKPGVVLVTSGPGATNAV TGITDALLDSIPMVVLTGQVPTTLIGTDAFQECDTVGITRHCTKHNYLVMDPDRLGPVMHEAFHIATHGRPGPVVIDIPK NVQVATGTYSVPEFIQHNSYRPQVEPDADAIGQAIDMIAAAERPVFYTGGGVINAGPDASAALRQLVGLTGAPITSTLMG LGAFPADDPKWLGMLGMHGTYEANMAMNRADLIVAVGARFDDRVTGRLDAFSPDSKKIHIDIDRSSINKIVPVDLAIVGD AGRALAALIAAWQDRGHKARDLGEWWRRVDGWRATRCLDFPEKKEPDADIMPQRAVKALFDATRGRDPIITTEVGQHQMW AAQHFGFSAPNRWLTSGGLGTMGYGFPAAVGAQIAHPNRLVICIAGEASLQMNIQEMGTVSQYRLPVKIFILNNEWMGMV RQWQELTYESRYSNSYSDSLPDFVKLAEAYGWTGLRIDTLGELEGGIARMIETPGPVIVDCRVAQLANCFPMIPSGAAHT DMILQPNDITGTMDDEAKALV >Mature_580_residues SGADMVVQALVDLGVDTVFGYPGGAVLPIYDALYKHPTIKHILVRHEQAATHAAEGYARSTGKPGVVLVTSGPGATNAVT GITDALLDSIPMVVLTGQVPTTLIGTDAFQECDTVGITRHCTKHNYLVMDPDRLGPVMHEAFHIATHGRPGPVVIDIPKN VQVATGTYSVPEFIQHNSYRPQVEPDADAIGQAIDMIAAAERPVFYTGGGVINAGPDASAALRQLVGLTGAPITSTLMGL GAFPADDPKWLGMLGMHGTYEANMAMNRADLIVAVGARFDDRVTGRLDAFSPDSKKIHIDIDRSSINKIVPVDLAIVGDA GRALAALIAAWQDRGHKARDLGEWWRRVDGWRATRCLDFPEKKEPDADIMPQRAVKALFDATRGRDPIITTEVGQHQMWA AQHFGFSAPNRWLTSGGLGTMGYGFPAAVGAQIAHPNRLVICIAGEASLQMNIQEMGTVSQYRLPVKIFILNNEWMGMVR QWQELTYESRYSNSYSDSLPDFVKLAEAYGWTGLRIDTLGELEGGIARMIETPGPVIVDCRVAQLANCFPMIPSGAAHTD MILQPNDITGTMDDEAKALV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=565, Percent_Identity=24.9557522123894, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI21361361, Length=560, Percent_Identity=25.3571428571429, Blast_Score=129, Evalue=1e-29, Organism=Escherichia coli, GI87081685, Length=577, Percent_Identity=49.0467937608319, Blast_Score=551, Evalue=1e-158, Organism=Escherichia coli, GI1790104, Length=564, Percent_Identity=44.3262411347518, Blast_Score=461, Evalue=1e-131, Organism=Escherichia coli, GI1786717, Length=597, Percent_Identity=33.1658291457286, Blast_Score=305, Evalue=7e-84, Organism=Escherichia coli, GI1787096, Length=549, Percent_Identity=28.2331511839709, Blast_Score=190, Evalue=3e-49, Organism=Escherichia coli, GI1788716, Length=552, Percent_Identity=25, Blast_Score=154, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17531301, Length=584, Percent_Identity=26.541095890411, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17531299, Length=584, Percent_Identity=26.541095890411, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17542570, Length=523, Percent_Identity=26.9598470363289, Blast_Score=129, Evalue=6e-30, Organism=Saccharomyces cerevisiae, GI6323755, Length=581, Percent_Identity=45.6110154905336, Blast_Score=501, Evalue=1e-142, Organism=Saccharomyces cerevisiae, GI6320816, Length=483, Percent_Identity=26.0869565217391, Blast_Score=117, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6320123, Length=588, Percent_Identity=21.4285714285714, Blast_Score=86, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323073, Length=494, Percent_Identity=22.6720647773279, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI19922626, Length=506, Percent_Identity=26.6798418972332, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 62668; Mature: 62537
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGADMVVQALVDLGVDTVFGYPGGAVLPIYDALYKHPTIKHILVRHEQAATHAAEGYAR CCCHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH STGKPGVVLVTSGPGATNAVTGITDALLDSIPMVVLTGQVPTTLIGTDAFQECDTVGITR CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCHHHHHHCCCCCCH HCTKHNYLVMDPDRLGPVMHEAFHIATHGRPGPVVIDIPKNVQVATGTYSVPEFIQHNSY HHCCCCCEEECHHHHCHHHHHHEEEEECCCCCCEEEECCCCCEEEECCCCCHHHHHCCCC RPQVEPDADAIGQAIDMIAAAERPVFYTGGGVINAGPDASAALRQLVGLTGAPITSTLMG CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHHHHCCCCCCHHHHHHH LGAFPADDPKWLGMLGMHGTYEANMAMNRADLIVAVGARFDDRVTGRLDAFSPDSKKIHI CCCCCCCCCCHHEEECCCCCEECCEECCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEE DIDRSSINKIVPVDLAIVGDAGRALAALIAAWQDRGHKARDLGEWWRRVDGWRATRCLDF EECHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCC PEKKEPDADIMPQRAVKALFDATRGRDPIITTEVGQHQMWAAQHFGFSAPNRWLTSGGLG CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEECCCCC TMGYGFPAAVGAQIAHPNRLVICIAGEASLQMNIQEMGTVSQYRLPVKIFILNNEWMGMV CCCCCCHHHHCCEECCCCEEEEEEECCCCEEEEHHHHCCHHHEECCEEEEEECCHHHHHH RQWQELTYESRYSNSYSDSLPDFVKLAEAYGWTGLRIDTLGELEGGIARMIETPGPVIVD HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHCCHHHHHHCCCCCEEEE CRVAQLANCFPMIPSGAAHTDMILQPNDITGTMDDEAKALV EEHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHCCC >Mature Secondary Structure SGADMVVQALVDLGVDTVFGYPGGAVLPIYDALYKHPTIKHILVRHEQAATHAAEGYAR CCHHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHH STGKPGVVLVTSGPGATNAVTGITDALLDSIPMVVLTGQVPTTLIGTDAFQECDTVGITR CCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEECCHHHHHHCCCCCCH HCTKHNYLVMDPDRLGPVMHEAFHIATHGRPGPVVIDIPKNVQVATGTYSVPEFIQHNSY HHCCCCCEEECHHHHCHHHHHHEEEEECCCCCCEEEECCCCCEEEECCCCCHHHHHCCCC RPQVEPDADAIGQAIDMIAAAERPVFYTGGGVINAGPDASAALRQLVGLTGAPITSTLMG CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCCCHHHHHHHHHCCCCCCHHHHHHH LGAFPADDPKWLGMLGMHGTYEANMAMNRADLIVAVGARFDDRVTGRLDAFSPDSKKIHI CCCCCCCCCCHHEEECCCCCEECCEECCCCCEEEEECCCCCCCCCCCEECCCCCCCEEEE DIDRSSINKIVPVDLAIVGDAGRALAALIAAWQDRGHKARDLGEWWRRVDGWRATRCLDF EECHHHCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCC PEKKEPDADIMPQRAVKALFDATRGRDPIITTEVGQHQMWAAQHFGFSAPNRWLTSGGLG CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCCCCEEECCCCC TMGYGFPAAVGAQIAHPNRLVICIAGEASLQMNIQEMGTVSQYRLPVKIFILNNEWMGMV CCCCCCHHHHCCEECCCCEEEEEEECCCCEEEEHHHHCCHHHEECCEEEEEECCHHHHHH RQWQELTYESRYSNSYSDSLPDFVKLAEAYGWTGLRIDTLGELEGGIARMIETPGPVIVD HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEECHHHHCCHHHHHHCCCCCEEEE CRVAQLANCFPMIPSGAAHTDMILQPNDITGTMDDEAKALV EEHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]