Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486916

Identifier: 103486916

GI number: 103486916

Start: 1480307

End: 1480705

Strand: Direct

Name: 103486916

Synonym: Sala_1430

Alternate gene names: NA

Gene position: 1480307-1480705 (Clockwise)

Preceding gene: 103486913

Following gene: 103486917

Centisome position: 44.25

GC content: 65.16

Gene sequence:

>399_bases
ATGCGTATCTTGAGCAAAGGCCTGATGGGCGCATTTGTCGCCGCCAGCGTCCTTGGCACCACACCGCTCCATGCGGGCGT
GACGACCCCGGCAAAGGCGCCGGGTTATCACGGGTTCGAACAGGCGTCGGACTTTCACCGCAAGCGGAAACATCACCGCC
ATTATGCGCGTGGCGAGCGGCTTGGCCGGGATTCGCGCATCTGGCGCGGCAATGACGGTCGCTATTATTGCAGGAAGGAC
AATGGCACGACCGGCCTGCTGATCGGCGGCGCCGTCGGCGGCCTCGCCGGTCACGAGATTGCAGGCGACGGCGACAAGCT
GCTCGGCACCGTGCTTGGCGCTGCCGGGGGTGCGCTGCTCGGTCGGGAGATCGACCGCGACAAATATCGCTGCCGTTAA

Upstream 100 bases:

>100_bases
CAAGGTTCATGCAACAGGATTCGGACCTGACTCGTTTTATTCCCGAAGCGCCCGGCTTCGTCCCGCGGAGACGAGGCGCC
GAACCAGGAAAGGACTTGTC

Downstream 100 bases:

>100_bases
CGAACAGAAACCGTCTCGCGTGCGGGTTTGAGACCCCTCCACCCGCACACGCTGATGGCGAGGGCACCGGTTAGCGCCGG
TGCCCTCAAGCGTGCAGGCG

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MRILSKGLMGAFVAASVLGTTPLHAGVTTPAKAPGYHGFEQASDFHRKRKHHRHYARGERLGRDSRIWRGNDGRYYCRKD
NGTTGLLIGGAVGGLAGHEIAGDGDKLLGTVLGAAGGALLGREIDRDKYRCR

Sequences:

>Translated_132_residues
MRILSKGLMGAFVAASVLGTTPLHAGVTTPAKAPGYHGFEQASDFHRKRKHHRHYARGERLGRDSRIWRGNDGRYYCRKD
NGTTGLLIGGAVGGLAGHEIAGDGDKLLGTVLGAAGGALLGREIDRDKYRCR
>Mature_132_residues
MRILSKGLMGAFVAASVLGTTPLHAGVTTPAKAPGYHGFEQASDFHRKRKHHRHYARGERLGRDSRIWRGNDGRYYCRKD
NGTTGLLIGGAVGGLAGHEIAGDGDKLLGTVLGAAGGALLGREIDRDKYRCR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14168; Mature: 14168

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILSKGLMGAFVAASVLGTTPLHAGVTTPAKAPGYHGFEQASDFHRKRKHHRHYARGER
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGRDSRIWRGNDGRYYCRKDNGTTGLLIGGAVGGLAGHEIAGDGDKLLGTVLGAAGGALL
CCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
GREIDRDKYRCR
CCCCCCCCCCCC
>Mature Secondary Structure
MRILSKGLMGAFVAASVLGTTPLHAGVTTPAKAPGYHGFEQASDFHRKRKHHRHYARGER
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LGRDSRIWRGNDGRYYCRKDNGTTGLLIGGAVGGLAGHEIAGDGDKLLGTVLGAAGGALL
CCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
GREIDRDKYRCR
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA