| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486917
Identifier: 103486917
GI number: 103486917
Start: 1480868
End: 1481419
Strand: Direct
Name: 103486917
Synonym: Sala_1431
Alternate gene names: NA
Gene position: 1480868-1481419 (Clockwise)
Preceding gene: 103486916
Following gene: 103486918
Centisome position: 44.27
GC content: 69.2
Gene sequence:
>552_bases ATGCTGAACGGCCCCCTGCTCGTGACCGAGCGACTGATCCTCCGCCCGCCCGCGGCCGAGGATTTTGACGCCTTTGCCGC GATGTGCGCCGAAGAAGAGACGATGCGCTTCATCGGCGGCACCTGCCCGCGTTCGGCGGCCTGGCGGCAATGGTGCACGC TCGCGGGAGCCTGGCACATTCGCGGCTTCTCGATGTTCTCGGTGATCGAGCGCGCCAGCGGCGAATGGGTCGGTCGCCTC GGCCCGTGGGAGCCCGACGGCTGGCCGGCGCCCGAAATCGGTTACGGCGTGCGCGCGAAGTTCGCGGGCAGGGGTTATGC CTTCGAAGGCTGTGTCGCCGCCTGCGATTTCGCGGTCGAGTTCCTGAAATGGCCCGAACTCATGCACAGCATCGACCCTG CCAACACGCGGTCGCAGGCGCTCGCACGGCGGCTGGGTGCAACGAACAGCGGCCCGACCCGCCTCCCCGCCCCCTTCGAG GACGCGCCCGTCGAGGCATGGACCCAGAGCGCCGGGGCCTGGCGCGTCAAACGAAAGGAGTTTCGCCCGTGA
Upstream 100 bases:
>100_bases GGCACCGGTTAGCGCCGGTGCCCTCAAGCGTGCAGGCGACTTGCCCATCGGCCGCTCTTGCCGCAGAAGCGTCATCCAAC GCGGCGGAAAAGAGAATATC
Downstream 100 bases:
>100_bases CCGACCATCATATCGACCCCGAACGCGCGCAGTTCGACGCCTTCAAGGCGCTGCCGCGCGACGCGGTCATCCACATGCTC AACCTTGTCCGCTTCCGCGA
Product: acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Acetyltransferase Gnat Family; Acetyltransferase GNAT Family; Acetyltransferase Protein; Ribosomal-Protein-Alanine Acetyltransferase; GNAT Family Acetyltransferase; Acetyltranferase; Acetyl Transferase; GCN5-Like N-Acetyltransferase; Gcn5-Related N-Acetyltransferase
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLNGPLLVTERLILRPPAAEDFDAFAAMCAEEETMRFIGGTCPRSAAWRQWCTLAGAWHIRGFSMFSVIERASGEWVGRL GPWEPDGWPAPEIGYGVRAKFAGRGYAFEGCVAACDFAVEFLKWPELMHSIDPANTRSQALARRLGATNSGPTRLPAPFE DAPVEAWTQSAGAWRVKRKEFRP
Sequences:
>Translated_183_residues MLNGPLLVTERLILRPPAAEDFDAFAAMCAEEETMRFIGGTCPRSAAWRQWCTLAGAWHIRGFSMFSVIERASGEWVGRL GPWEPDGWPAPEIGYGVRAKFAGRGYAFEGCVAACDFAVEFLKWPELMHSIDPANTRSQALARRLGATNSGPTRLPAPFE DAPVEAWTQSAGAWRVKRKEFRP >Mature_183_residues MLNGPLLVTERLILRPPAAEDFDAFAAMCAEEETMRFIGGTCPRSAAWRQWCTLAGAWHIRGFSMFSVIERASGEWVGRL GPWEPDGWPAPEIGYGVRAKFAGRGYAFEGCVAACDFAVEFLKWPELMHSIDPANTRSQALARRLGATNSGPTRLPAPFE DAPVEAWTQSAGAWRVKRKEFRP
Specific function: Unknown
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20288; Mature: 20288
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNGPLLVTERLILRPPAAEDFDAFAAMCAEEETMRFIGGTCPRSAAWRQWCTLAGAWHI CCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHH RGFSMFSVIERASGEWVGRLGPWEPDGWPAPEIGYGVRAKFAGRGYAFEGCVAACDFAVE CHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH FLKWPELMHSIDPANTRSQALARRLGATNSGPTRLPAPFEDAPVEAWTQSAGAWRVKRKE HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHC FRP CCC >Mature Secondary Structure MLNGPLLVTERLILRPPAAEDFDAFAAMCAEEETMRFIGGTCPRSAAWRQWCTLAGAWHI CCCCCEEHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHH RGFSMFSVIERASGEWVGRLGPWEPDGWPAPEIGYGVRAKFAGRGYAFEGCVAACDFAVE CHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHH FLKWPELMHSIDPANTRSQALARRLGATNSGPTRLPAPFEDAPVEAWTQSAGAWRVKRKE HHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEHHHHC FRP CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA