| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is acpS
Identifier: 103486895
GI number: 103486895
Start: 1462724
End: 1463125
Strand: Direct
Name: acpS
Synonym: Sala_1409
Alternate gene names: 103486895
Gene position: 1462724-1463125 (Clockwise)
Preceding gene: 103486894
Following gene: 103486896
Centisome position: 43.73
GC content: 66.92
Gene sequence:
>402_bases ATGATCATCGGCCTCGGCTCCGACCTCTGTAATATCGAGCGTATCCAGGCTTCGCTCGACCGTTTCGGCGAGCGCTTCGA AAATCGCGTCTTTACCGACGTCGAGCGCGCCAAGGCGGCGCGGCGGCCGTTCACGCGCGCGGGCACCTACGCCAAGCGGT TCGCCGCGAAGGAGGCCTTCTCCAAGGCCGTCGGCACCGGCTTCAAGCGCGGCGTGTTCATGAAGGACATCGGCGTCGTC AACGCGCCGTCGGGGGCGCCGACGCTGGCGCTGACCGGCGGCGCGGCAGAGCGGCTCGCGGCCATGATACCGCCCGGTCA CACGGCGCATATCCACCTGACATTGACCGACGACCACCCCTGGGCGCAGGCGTTCGTCATCATCGAAGCCATCAAGGACT GA
Upstream 100 bases:
>100_bases ATGGCATAGGCTTCCTGTTTTTCACCTGCGTCCTGTATGTGTTTATGCGGTTGATCTTCAAATTTGTGCGCGCGAAGGTC CAGCACGACGAGCGGCGGTC
Downstream 100 bases:
>100_bases CCGGATAATGACGAAGAAAAAGACGAAGGATGACGGAAGCTGGGGCAAGCTGATCCGCGATATTGCGGTGATATTGCTGC TCGTGCTCGCCATCCACAGC
Product: 4'-phosphopantetheinyl transferase
Products: NA
Alternate protein names: Holo-ACP synthase; 4'-phosphopantetheinyl transferase AcpS
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MIIGLGSDLCNIERIQASLDRFGERFENRVFTDVERAKAARRPFTRAGTYAKRFAAKEAFSKAVGTGFKRGVFMKDIGVV NAPSGAPTLALTGGAAERLAAMIPPGHTAHIHLTLTDDHPWAQAFVIIEAIKD
Sequences:
>Translated_133_residues MIIGLGSDLCNIERIQASLDRFGERFENRVFTDVERAKAARRPFTRAGTYAKRFAAKEAFSKAVGTGFKRGVFMKDIGVV NAPSGAPTLALTGGAAERLAAMIPPGHTAHIHLTLTDDHPWAQAFVIIEAIKD >Mature_133_residues MIIGLGSDLCNIERIQASLDRFGERFENRVFTDVERAKAARRPFTRAGTYAKRFAAKEAFSKAVGTGFKRGVFMKDIGVV NAPSGAPTLALTGGAAERLAAMIPPGHTAHIHLTLTDDHPWAQAFVIIEAIKD
Specific function: Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein
COG id: COG0736
COG function: function code I; Phosphopantetheinyl transferase (holo-ACP synthase)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the P-Pant transferase superfamily. AcpS family
Homologues:
Organism=Escherichia coli, GI1788916, Length=134, Percent_Identity=41.044776119403, Blast_Score=78, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ACPS_SPHAL (Q1GT99)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616456.1 - ProteinModelPortal: Q1GT99 - SMR: Q1GT99 - GeneID: 4081765 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1409 - NMPDR: fig|317655.9.peg.1342 - HOGENOM: HBG734479 - OMA: QGVFWRD - ProtClustDB: PRK00070 - BioCyc: SALA317655:SALA_1409-MONOMER - BRENDA: 2.7.8.7 - GO: GO:0005737 - HAMAP: MF_00101 - InterPro: IPR008278 - InterPro: IPR002582 - InterPro: IPR004568 - ProDom: PD004282 - TIGRFAMs: TIGR00516 - TIGRFAMs: TIGR00556
Pfam domain/function: PF01648 ACPS; SSF56214 4-PPT_transf
EC number: =2.7.8.7
Molecular weight: Translated: 14410; Mature: 14410
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIGLGSDLCNIERIQASLDRFGERFENRVFTDVERAKAARRPFTRAGTYAKRFAAKEAF CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SKAVGTGFKRGVFMKDIGVVNAPSGAPTLALTGGAAERLAAMIPPGHTAHIHLTLTDDHP HHHHCCCHHCCEEEHHCCCEECCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEEEECCCC WAQAFVIIEAIKD HHHHHHHEEECCC >Mature Secondary Structure MIIGLGSDLCNIERIQASLDRFGERFENRVFTDVERAKAARRPFTRAGTYAKRFAAKEAF CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH SKAVGTGFKRGVFMKDIGVVNAPSGAPTLALTGGAAERLAAMIPPGHTAHIHLTLTDDHP HHHHCCCHHCCEEEHHCCCEECCCCCCEEEEECCHHHHHHHHCCCCCEEEEEEEEECCCC WAQAFVIIEAIKD HHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA