Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486894

Identifier: 103486894

GI number: 103486894

Start: 1462476

End: 1462727

Strand: Direct

Name: 103486894

Synonym: Sala_1408

Alternate gene names: NA

Gene position: 1462476-1462727 (Clockwise)

Preceding gene: 103486893

Following gene: 103486895

Centisome position: 43.72

GC content: 46.43

Gene sequence:

>252_bases
ATGAAAACGTCCGATTTTGTCGAGAAACAGTGGCGTGCTTCCATTTGGTTTCTCAAGATTTTTCCGTTCTTCATTCTGCT
GATTGTCGTTATAAACATTTGGCACGATGCAGATCAGGGGAAGCCATTTGACTGGATGCACATCGTTTATGGCATAGGCT
TCCTGTTTTTCACCTGCGTCCTGTATGTGTTTATGCGGTTGATCTTCAAATTTGTGCGCGCGAAGGTCCAGCACGACGAG
CGGCGGTCATGA

Upstream 100 bases:

>100_bases
CCGAACTCAACATCGGCCATTATCTGATCGGCGAGGCGATCTTTACGGGGCTGGAAGATGCGGTGCGGCGAATGCGGGCG
CTGATGGATGAGGCGCGGGG

Downstream 100 bases:

>100_bases
TCATCGGCCTCGGCTCCGACCTCTGTAATATCGAGCGTATCCAGGCTTCGCTCGACCGTTTCGGCGAGCGCTTCGAAAAT
CGCGTCTTTACCGACGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MKTSDFVEKQWRASIWFLKIFPFFILLIVVINIWHDADQGKPFDWMHIVYGIGFLFFTCVLYVFMRLIFKFVRAKVQHDE
RRS

Sequences:

>Translated_83_residues
MKTSDFVEKQWRASIWFLKIFPFFILLIVVINIWHDADQGKPFDWMHIVYGIGFLFFTCVLYVFMRLIFKFVRAKVQHDE
RRS
>Mature_83_residues
MKTSDFVEKQWRASIWFLKIFPFFILLIVVINIWHDADQGKPFDWMHIVYGIGFLFFTCVLYVFMRLIFKFVRAKVQHDE
RRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10178; Mature: 10178

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSDFVEKQWRASIWFLKIFPFFILLIVVINIWHDADQGKPFDWMHIVYGIGFLFFTCV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LYVFMRLIFKFVRAKVQHDERRS
HHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKTSDFVEKQWRASIWFLKIFPFFILLIVVINIWHDADQGKPFDWMHIVYGIGFLFFTCV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LYVFMRLIFKFVRAKVQHDERRS
HHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA