| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is pyrE
Identifier: 103486892
GI number: 103486892
Start: 1461146
End: 1461736
Strand: Direct
Name: pyrE
Synonym: Sala_1406
Alternate gene names: 103486892
Gene position: 1461146-1461736 (Clockwise)
Preceding gene: 103486880
Following gene: 103486893
Centisome position: 43.68
GC content: 67.85
Gene sequence:
>591_bases ATGACTGACGACCAAATCCTGGCCGAGTTCCGTGCCGCCGACGCCCTGCTGCAGGGGCATTTCCTGCTCTCCTCCGGCCG CCACAGCGAATATTATCTGCAATGCGCGCGCGTGCTGATGGATACGGAACGCGCCGGGCGCCTCGCCGCCGCGCTCGCCG CCAAGCTGCCGCGCGAACTCAAGCAGGCGATCGACCTTGTCGTCTCGCCCGCGATGGGCGGCGTCATCATCGGGCACGAA ATGGGCCGCGCGCTCGGCAAGCCGGCGATTTTCGTCGAACGCCCGACCGGCACCTTCGAACTGCGTCGCGGCTTCACCAT CGATCCCGGCGCCAAGGTGCTGATGGTCGAGGACGTCGTGACCACCGGCCTGTCCTCACGCGAAGCCATGGAAGCGGTGC GCGCCGCAGGCGGCGAGGTCGTCGCCGAAGCCGCGCTCGTCGATCGCTCGGCAGGTAGCAACATCGACCTTGGCGTGCCC TTCTACCCGCTCGTCGCGATCAACTTCCCGACCTATGCCGCCGACGAACTGCCCCCCGAACTCGCGGGCACCGAGGCGAT CAAGCCCGGCAGCCGGAGTGTGGCAGCTTGA
Upstream 100 bases:
>100_bases CCTCAAGCATCTCTAACACTATTTTGCGGCGGGCAAACAGGCGCCGCCAAAACCCGGTCGCCCGCCGCGGGCGACGCTAT GGACAAAAGACCGATCTCCC
Downstream 100 bases:
>100_bases ACGTCGCGCCCTCTCCGCACCGCCTGCGGCTCGGCGTCAACATCGACCATGTCGCGACGATCCGCAATGCGCGCGGCGGC GAGCATCCCGACCCGGTGCG
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MTDDQILAEFRAADALLQGHFLLSSGRHSEYYLQCARVLMDTERAGRLAAALAAKLPRELKQAIDLVVSPAMGGVIIGHE MGRALGKPAIFVERPTGTFELRRGFTIDPGAKVLMVEDVVTTGLSSREAMEAVRAAGGEVVAEAALVDRSAGSNIDLGVP FYPLVAINFPTYAADELPPELAGTEAIKPGSRSVAA
Sequences:
>Translated_196_residues MTDDQILAEFRAADALLQGHFLLSSGRHSEYYLQCARVLMDTERAGRLAAALAAKLPRELKQAIDLVVSPAMGGVIIGHE MGRALGKPAIFVERPTGTFELRRGFTIDPGAKVLMVEDVVTTGLSSREAMEAVRAAGGEVVAEAALVDRSAGSNIDLGVP FYPLVAINFPTYAADELPPELAGTEAIKPGSRSVAA >Mature_195_residues TDDQILAEFRAADALLQGHFLLSSGRHSEYYLQCARVLMDTERAGRLAAALAAKLPRELKQAIDLVVSPAMGGVIIGHEM GRALGKPAIFVERPTGTFELRRGFTIDPGAKVLMVEDVVTTGLSSREAMEAVRAAGGEVVAEAALVDRSAGSNIDLGVPF YPLVAINFPTYAADELPPELAGTEAIKPGSRSVAA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PYRE_SPHAL (Q1GTA2)
Other databases:
- EMBL: CP000356 - RefSeq: YP_616453.1 - ProteinModelPortal: Q1GTA2 - SMR: Q1GTA2 - GeneID: 4081762 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_1406 - NMPDR: fig|317655.9.peg.1340 - HOGENOM: HBG404341 - OMA: FYLQSAK - ProtClustDB: PRK00455 - BioCyc: SALA317655:SALA_1406-MONOMER - BRENDA: 2.4.2.10 - HAMAP: MF_01208 - InterPro: IPR023031 - InterPro: IPR006273 - InterPro: IPR000836 - TIGRFAMs: TIGR01367
Pfam domain/function: PF00156 Pribosyltran
EC number: =2.4.2.10
Molecular weight: Translated: 20719; Mature: 20588
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER
Important sites: BINDING 121-121 BINDING 149-149
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDQILAEFRAADALLQGHFLLSSGRHSEYYLQCARVLMDTERAGRLAAALAAKLPREL CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQAIDLVVSPAMGGVIIGHEMGRALGKPAIFVERPTGTFELRRGFTIDPGAKVLMVEDVV HHHHHHHHCCCCCCEEECHHHHHHHCCCEEEEECCCCCEEECCCCEECCCCEEEEEHHHH TTGLSSREAMEAVRAAGGEVVAEAALVDRSAGSNIDLGVPFYPLVAINFPTYAADELPPE HCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHH LAGTEAIKPGSRSVAA HCCCCCCCCCCCCCCC >Mature Secondary Structure TDDQILAEFRAADALLQGHFLLSSGRHSEYYLQCARVLMDTERAGRLAAALAAKLPREL CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KQAIDLVVSPAMGGVIIGHEMGRALGKPAIFVERPTGTFELRRGFTIDPGAKVLMVEDVV HHHHHHHHCCCCCCEEECHHHHHHHCCCEEEEECCCCCEEECCCCEECCCCEEEEEHHHH TTGLSSREAMEAVRAAGGEVVAEAALVDRSAGSNIDLGVPFYPLVAINFPTYAADELPPE HCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHH LAGTEAIKPGSRSVAA HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA