| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is phhA [H]
Identifier: 103486878
GI number: 103486878
Start: 1447370
End: 1448242
Strand: Reverse
Name: phhA [H]
Synonym: Sala_1392
Alternate gene names: 103486878
Gene position: 1448242-1447370 (Counterclockwise)
Preceding gene: 103486881
Following gene: 103486877
Centisome position: 43.29
GC content: 66.21
Gene sequence:
>873_bases TTGGCCGCGACGCATATCTTCGACGCACCGCCCGAAGGCGTCGCGGCCGACTGGACGATGCCGCAGGAGTGGCAGGCCTT CACGCCCGAACAGCATCGCACGTGGCGGACCTTGTTCGACCGGCAGTCGGCGGCGATGGGGGGCTATGCCTGCCGCGCCT TCCTCGACGGGCTGGGCCTGCTTCGTCGGCTCAGACCCGGTGTTCCCGATTTTGCCGAGCTCAACGCTCTGCTGAAACCG GCATCGGGATGGGAGGTTGTCGCGGTTCCCGGCTGGATCCCCAACGCCCCCTTTTTCGAGCATCTGGCGAACCGGCGCTT TCCCGCCGCCAATTTTGTGCGTCCGCCCGAACAGATCGCCTACAGCGAAGAGCCCGACATGTTTCACGACATTTTCGGGC ATGTGCCGATGCTGGCCAATCCCGCCTTCGGCGACTTTCTGGTCGCCTATGGCGAGGCGGGACTGCGCGCCGAAAGCTTG GGCGCGTCGGATTATCTCGGGCGGCTCTGGCTCTATACGGTCGAGTTCGGGCTGGTGGTGGAGGAGGGCGAATTGCGCGC CTTCGGCGGCGGCCTGCTCTCCAGCCTCGCCGAAACGGCCTTTGCGCTGACCGCTCCCGAACCGCGGCGCATCTGGCTCG ACGTCGAGCGCGCGATGCGGACGCGCTATCATTTCGACGCCTTTCAGCAGACCTATTTCGTCGTCGAGGGGTTCGATCAA TTGCTGCGCGCGACCGAGGAGGCCGATTTCGCGAGCCTCTATCGCAAGATCGCGAACGAGCCGGCGCTCGCGCCGGGTGA TGCGTGGCGCGGCGATGTCGCCTATGAAGGACGCCTGCCGGTCCGTCCGGCGAGCGGAGAGGCGGCGACATGA
Upstream 100 bases:
>100_bases AAGGACATTTGACCCGAAACGGAGGATCATCGTCCGATAATCCGAACAATGTTTGCCTGGGTTCGCGCTACTCTTTCGAA AGACAATCCGGGAGAGAGGC
Downstream 100 bases:
>100_bases TCAGGCAGACGCGCGATGGCGACACCGAGGTTTTCGAAACCGAGATCGACGGCGAAACGATCCAGTGGGACAACGGGCTG ACCTATGCGCGCCACATCCA
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MAATHIFDAPPEGVAADWTMPQEWQAFTPEQHRTWRTLFDRQSAAMGGYACRAFLDGLGLLRRLRPGVPDFAELNALLKP ASGWEVVAVPGWIPNAPFFEHLANRRFPAANFVRPPEQIAYSEEPDMFHDIFGHVPMLANPAFGDFLVAYGEAGLRAESL GASDYLGRLWLYTVEFGLVVEEGELRAFGGGLLSSLAETAFALTAPEPRRIWLDVERAMRTRYHFDAFQQTYFVVEGFDQ LLRATEEADFASLYRKIANEPALAPGDAWRGDVAYEGRLPVRPASGEAAT
Sequences:
>Translated_290_residues MAATHIFDAPPEGVAADWTMPQEWQAFTPEQHRTWRTLFDRQSAAMGGYACRAFLDGLGLLRRLRPGVPDFAELNALLKP ASGWEVVAVPGWIPNAPFFEHLANRRFPAANFVRPPEQIAYSEEPDMFHDIFGHVPMLANPAFGDFLVAYGEAGLRAESL GASDYLGRLWLYTVEFGLVVEEGELRAFGGGLLSSLAETAFALTAPEPRRIWLDVERAMRTRYHFDAFQQTYFVVEGFDQ LLRATEEADFASLYRKIANEPALAPGDAWRGDVAYEGRLPVRPASGEAAT >Mature_289_residues AATHIFDAPPEGVAADWTMPQEWQAFTPEQHRTWRTLFDRQSAAMGGYACRAFLDGLGLLRRLRPGVPDFAELNALLKPA SGWEVVAVPGWIPNAPFFEHLANRRFPAANFVRPPEQIAYSEEPDMFHDIFGHVPMLANPAFGDFLVAYGEAGLRAESLG ASDYLGRLWLYTVEFGLVVEEGELRAFGGGLLSSLAETAFALTAPEPRRIWLDVERAMRTRYHFDAFQQTYFVVEGFDQL LRATEEADFASLYRKIANEPALAPGDAWRGDVAYEGRLPVRPASGEAAT
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI4759248, Length=217, Percent_Identity=34.5622119815668, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI31795563, Length=222, Percent_Identity=34.6846846846847, Blast_Score=127, Evalue=1e-29, Organism=Homo sapiens, GI88900503, Length=220, Percent_Identity=34.0909090909091, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI88900501, Length=220, Percent_Identity=34.0909090909091, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI88900505, Length=220, Percent_Identity=34.0909090909091, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI4557819, Length=221, Percent_Identity=28.9592760180996, Blast_Score=108, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17531391, Length=221, Percent_Identity=31.6742081447964, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71980736, Length=225, Percent_Identity=29.7777777777778, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI115533973, Length=235, Percent_Identity=28.936170212766, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI115532103, Length=235, Percent_Identity=28.936170212766, Blast_Score=97, Evalue=8e-21, Organism=Caenorhabditis elegans, GI71980731, Length=142, Percent_Identity=27.4647887323944, Blast_Score=75, Evalue=5e-14, Organism=Drosophila melanogaster, GI24660393, Length=224, Percent_Identity=32.1428571428571, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI62472054, Length=224, Percent_Identity=32.1428571428571, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI24654994, Length=223, Percent_Identity=30.9417040358744, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI17136776, Length=215, Percent_Identity=30.2325581395349, Blast_Score=102, Evalue=3e-22, Organism=Drosophila melanogaster, GI17136774, Length=215, Percent_Identity=30.2325581395349, Blast_Score=102, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 32270; Mature: 32138
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATHIFDAPPEGVAADWTMPQEWQAFTPEQHRTWRTLFDRQSAAMGGYACRAFLDGLGL CCCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRLRPGVPDFAELNALLKPASGWEVVAVPGWIPNAPFFEHLANRRFPAANFVRPPEQIA HHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHC YSEEPDMFHDIFGHVPMLANPAFGDFLVAYGEAGLRAESLGASDYLGRLWLYTVEFGLVV CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHEEEEEEEEE EEGELRAFGGGLLSSLAETAFALTAPEPRRIWLDVERAMRTRYHFDAFQQTYFVVEGFDQ ECCCCEEHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLRATEEADFASLYRKIANEPALAPGDAWRGDVAYEGRLPVRPASGEAAT HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC >Mature Secondary Structure AATHIFDAPPEGVAADWTMPQEWQAFTPEQHRTWRTLFDRQSAAMGGYACRAFLDGLGL CCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRRLRPGVPDFAELNALLKPASGWEVVAVPGWIPNAPFFEHLANRRFPAANFVRPPEQIA HHHHCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCHHHHC YSEEPDMFHDIFGHVPMLANPAFGDFLVAYGEAGLRAESLGASDYLGRLWLYTVEFGLVV CCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHCCCHHHHHHHHHEEEEEEEEE EEGELRAFGGGLLSSLAETAFALTAPEPRRIWLDVERAMRTRYHFDAFQQTYFVVEGFDQ ECCCCEEHHHHHHHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLRATEEADFASLYRKIANEPALAPGDAWRGDVAYEGRLPVRPASGEAAT HHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]