| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is kynU [H]
Identifier: 103486875
GI number: 103486875
Start: 1444604
End: 1445845
Strand: Reverse
Name: kynU [H]
Synonym: Sala_1389
Alternate gene names: 103486875
Gene position: 1445845-1444604 (Counterclockwise)
Preceding gene: 103486876
Following gene: 103486874
Centisome position: 43.22
GC content: 66.67
Gene sequence:
>1242_bases ATGACCGGCACGATGGCCGTCGCCGATGTGGTGTCGCTCGACGCGGGCGACCCGCTCGCGCCTTTTCGCGACCGCTTTCA TCTGCGCGAAGGGCTGATCTATCTCGACGGCAATTCGCTCGGTGCGTTGCCCAGGGCGACGGGCGACCGGCTCGCCGAAG TCATCGGCGACGAGTGGGGCGAGGGGCTGATCACCTCGTGGCTCGGCGCCTCATGGTCGACCGCCCCGCGGCGGATCGGC GACAAGATCGCCCGGCTGGTCGGCGCCCACCCCGGCGAGATCGTCGCGACCGATTCCACCTCGGTCAATATCTTCAAGGC GTTGACCGCCGCGCTTTCCTTGCGGCGCGAACGCCCGGTGATCCTGTCGGAAGCCACCAACTTTCCGACCGACGTATATA TGATGCAGGGGATCGAGGCTTTTTCGGGCGGGCGTGTGAAGGCGGTCACGGTGGCGCCCGATGCCATCGTCGATGCGCTG AGCGATGAGGTGGCGGTGCTGCTGCTGACGCAGGTGCACTACAAGTCGGGCCGCGTTCGCGACATGGCGGCGATCACGCG CGCCGCGCACGAAGCGGGCGCGCTGATCGTCTGGGATCTGAGCCACAGCGCGGGGGCGATTCCGGTCGATCTCAACGGTG CGAACGCCGATTTTGCGATCGGTTGCGGCTACAAGTTTCTCAACGGTGGCCCCGGTGCGCCGGCCTATCTCTTTGCCGCT GCGCGGCACCATGGCGCCACGCCGATCTTGTCGGGCTGGTTCGGTCACGCGCGGCCGTTCGATTTCGAGGAGGATTATGA TCCCGCCGCCGGGATCGCACGCTTCCAGTGCGGCACGCCGCCGGTGCTGGGTCTTGCGGCGCTCGAAGTCGGCGTCGACC TGATGCTCGAAGCCGATATGGCCGAGGTGCGCCGCAAGTCGCTGGCGCTTGGCGATCTACTCATCGCGCGGATGCAGCCC TTGTGCGATGCCTATGGCTTTGCTCTGGCAAGCCCGCGCGATCATGCGCTGCGCGGCAGCCAGGTCGCCTATGCGCACCG CCAGGGCTATCAGATCGCGCAGGCGCTCAGGGAACTGGATGTCATTGCGGACTTCCGCGCCCCCGACATTTTGCGCTTCG GGCTGACGCCGCTTTACCTGCGGTACAGCGACATCGTCGAGACGGTCGAACGGCTCGAAAGGGTCTGCGCCACCCGCGCG TGGGACAAGCCGCAATATCACCAGCGGGCGGCGGTGACATGA
Upstream 100 bases:
>100_bases TCGATGATGTGCCGCCCGGCCGCTACGAACTGATTGCCCTGCCGCTGCGCATCGTCGGCGCCGATGCCAGCCCGGTGCGC GCCATTCTGAGGGAAATCGC
Downstream 100 bases:
>100_bases GCGATACGTCGGCCTCCCTCCTGCCCAAATCGCGCGTCGCCGCAGTGCAGGCGGCGCCGGTGTTCCTCGATCCGGCAGCG ACGGTCGACAAGGCGTGTGC
Product: kynureninase
Products: NA
Alternate protein names: L-kynurenine hydrolase [H]
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTGTMAVADVVSLDAGDPLAPFRDRFHLREGLIYLDGNSLGALPRATGDRLAEVIGDEWGEGLITSWLGASWSTAPRRIG DKIARLVGAHPGEIVATDSTSVNIFKALTAALSLRRERPVILSEATNFPTDVYMMQGIEAFSGGRVKAVTVAPDAIVDAL SDEVAVLLLTQVHYKSGRVRDMAAITRAAHEAGALIVWDLSHSAGAIPVDLNGANADFAIGCGYKFLNGGPGAPAYLFAA ARHHGATPILSGWFGHARPFDFEEDYDPAAGIARFQCGTPPVLGLAALEVGVDLMLEADMAEVRRKSLALGDLLIARMQP LCDAYGFALASPRDHALRGSQVAYAHRQGYQIAQALRELDVIADFRAPDILRFGLTPLYLRYSDIVETVERLERVCATRA WDKPQYHQRAAVT
Sequences:
>Translated_413_residues MTGTMAVADVVSLDAGDPLAPFRDRFHLREGLIYLDGNSLGALPRATGDRLAEVIGDEWGEGLITSWLGASWSTAPRRIG DKIARLVGAHPGEIVATDSTSVNIFKALTAALSLRRERPVILSEATNFPTDVYMMQGIEAFSGGRVKAVTVAPDAIVDAL SDEVAVLLLTQVHYKSGRVRDMAAITRAAHEAGALIVWDLSHSAGAIPVDLNGANADFAIGCGYKFLNGGPGAPAYLFAA ARHHGATPILSGWFGHARPFDFEEDYDPAAGIARFQCGTPPVLGLAALEVGVDLMLEADMAEVRRKSLALGDLLIARMQP LCDAYGFALASPRDHALRGSQVAYAHRQGYQIAQALRELDVIADFRAPDILRFGLTPLYLRYSDIVETVERLERVCATRA WDKPQYHQRAAVT >Mature_412_residues TGTMAVADVVSLDAGDPLAPFRDRFHLREGLIYLDGNSLGALPRATGDRLAEVIGDEWGEGLITSWLGASWSTAPRRIGD KIARLVGAHPGEIVATDSTSVNIFKALTAALSLRRERPVILSEATNFPTDVYMMQGIEAFSGGRVKAVTVAPDAIVDALS DEVAVLLLTQVHYKSGRVRDMAAITRAAHEAGALIVWDLSHSAGAIPVDLNGANADFAIGCGYKFLNGGPGAPAYLFAAA RHHGATPILSGWFGHARPFDFEEDYDPAAGIARFQCGTPPVLGLAALEVGVDLMLEADMAEVRRKSLALGDLLIARMQPL CDAYGFALASPRDHALRGSQVAYAHRQGYQIAQALRELDVIADFRAPDILRFGLTPLYLRYSDIVETVERLERVCATRAW DKPQYHQRAAVT
Specific function: Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively [H]
COG id: COG3844
COG function: function code E; Kynureninase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kynureninase family [H]
Homologues:
Organism=Homo sapiens, GI4504937, Length=433, Percent_Identity=25.8660508083141, Blast_Score=139, Evalue=4e-33, Organism=Homo sapiens, GI74101437, Length=280, Percent_Identity=27.5, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17550466, Length=427, Percent_Identity=26.2295081967213, Blast_Score=136, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6323261, Length=415, Percent_Identity=26.7469879518072, Blast_Score=140, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000192 - InterPro: IPR010111 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00266 Aminotran_5 [H]
EC number: =3.7.1.3 [H]
Molecular weight: Translated: 44473; Mature: 44342
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTMAVADVVSLDAGDPLAPFRDRFHLREGLIYLDGNSLGALPRATGDRLAEVIGDEWG CCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC EGLITSWLGASWSTAPRRIGDKIARLVGAHPGEIVATDSTSVNIFKALTAALSLRRERPV CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCE ILSEATNFPTDVYMMQGIEAFSGGRVKAVTVAPDAIVDALSDEVAVLLLTQVHYKSGRVR EEECCCCCCHHHHHHHCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH DMAAITRAAHEAGALIVWDLSHSAGAIPVDLNGANADFAIGCGYKFLNGGPGAPAYLFAA HHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHH ARHHGATPILSGWFGHARPFDFEEDYDPAAGIARFQCGTPPVLGLAALEVGVDLMLEADM HHHCCCCCHHHCCCCCCCCCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHCHHHEEECCH AEVRRKSLALGDLLIARMQPLCDAYGFALASPRDHALRGSQVAYAHRQGYQIAQALRELD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH VIADFRAPDILRFGLTPLYLRYSDIVETVERLERVCATRAWDKPQYHQRAAVT HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC >Mature Secondary Structure TGTMAVADVVSLDAGDPLAPFRDRFHLREGLIYLDGNSLGALPRATGDRLAEVIGDEWG CCCHHHHHHHCCCCCCCCCHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC EGLITSWLGASWSTAPRRIGDKIARLVGAHPGEIVATDSTSVNIFKALTAALSLRRERPV CHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCE ILSEATNFPTDVYMMQGIEAFSGGRVKAVTVAPDAIVDALSDEVAVLLLTQVHYKSGRVR EEECCCCCCHHHHHHHCHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHH DMAAITRAAHEAGALIVWDLSHSAGAIPVDLNGANADFAIGCGYKFLNGGPGAPAYLFAA HHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCEEEECCCCCCCCCCCCHHHHHHH ARHHGATPILSGWFGHARPFDFEEDYDPAAGIARFQCGTPPVLGLAALEVGVDLMLEADM HHHCCCCCHHHCCCCCCCCCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHCHHHEEECCH AEVRRKSLALGDLLIARMQPLCDAYGFALASPRDHALRGSQVAYAHRQGYQIAQALRELD HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHH VIADFRAPDILRFGLTPLYLRYSDIVETVERLERVCATRAWDKPQYHQRAAVT HHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA