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The map label for this gene is nuoC [H]

Identifier: 103486795

GI number: 103486795

Start: 1369044

End: 1369868

Strand: Reverse

Name: nuoC [H]

Synonym: Sala_1309

Alternate gene names: 103486795

Gene position: 1369868-1369044 (Counterclockwise)

Preceding gene: 103486796

Following gene: 103486794

Centisome position: 40.95

GC content: 65.21

Gene sequence:

>825_bases
TTGCTCACGCATGTCTTCACCGTCGGCGAGGACAGCATCACCGTGCGCCGCGAGGCGATCGCCGGCGTGATGATCAGCCT
TCGCGACAATCTCGATTACCAGCAGCTGATGGAGATCGCGGGGGTCGATTATCCCGACCGGCCCGAGCGGTTCGAGGTCG
TCTATCACCTGCTCAGCGTGACGAAGAACCACCGTCTTCGCGTGCGCGTGTCGACCGACGAGGCGACGCCGGTGCCGAGC
ATTGTGCCCGTCTGGCCCGTGGCGGGCTGGCTCGAGCGCGAGGTGTTCGACATGTATGGCGTGTTGTTCGCGGGCAATCC
CGACCTGCGCCGCATCCTGACCGACTATGGTTTCCAGGGGCACCCGCAGCGCAAGGACTTTCCGCTGACCGGCTATATCG
AGCTGCGTTACAGCGAAGAAGACAAGCGCGTCGTCTATGAGCCGGTGAAGCTGGCGCAGGATTTCCGCAACTTCGACTTC
CTGTCCCCGTGGGAAGGCGCCGACTATGTGCTGCCCGGCGACGAGAAAGCCGGTGGTACGGGCGAAGCGCCGGGCAAGGG
CGCGCCGACGCCGATGACCGCCAAGGAGGTCAAGGCATCCGACGACAAGGCGAAGGCTGCGCCGCCGCCGACCCCGAAAA
CGACCGAAAAACCTGCCGATACGGGCGCGGGCAACAAGACGAACAAGGCCGCCGCAAAGCCGAGCAAGGATGGTGCGAAG
GCGAAGCCTGCTGCAAAGGCCAAGACGCCCGCGACCAAGAAGGCGGAAAAGGCGCCGGCCAGGCCGCGCGCGCCGCGCAA
GCCGAAAACAGGAGGTGACGCATGA

Upstream 100 bases:

>100_bases
GCCGCACCGGGACGATCGAACGCTGATGGCCAGTCCCGCTCCCCTTGTCGCCCCGCGCGCGGGCCTTGCCGCCGCGCTCG
AAAAACTGCTCGGCGACGAT

Downstream 100 bases:

>100_bases
CCGATGCTCCTCAGGTCAGGCACCACGGCAGCGACATGTTTGAAGGCTATCCGGTCGATACCGCGAACACCGCGGGCGAT
CAGGCCGTCACCAATTACAC

Product: NADH (or F420H2) dehydrogenase, subunit C

Products: NA

Alternate protein names: NADH dehydrogenase I subunit C; NDH-1 subunit C [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLTHVFTVGEDSITVRREAIAGVMISLRDNLDYQQLMEIAGVDYPDRPERFEVVYHLLSVTKNHRLRVRVSTDEATPVPS
IVPVWPVAGWLEREVFDMYGVLFAGNPDLRRILTDYGFQGHPQRKDFPLTGYIELRYSEEDKRVVYEPVKLAQDFRNFDF
LSPWEGADYVLPGDEKAGGTGEAPGKGAPTPMTAKEVKASDDKAKAAPPPTPKTTEKPADTGAGNKTNKAAAKPSKDGAK
AKPAAKAKTPATKKAEKAPARPRAPRKPKTGGDA

Sequences:

>Translated_274_residues
MLTHVFTVGEDSITVRREAIAGVMISLRDNLDYQQLMEIAGVDYPDRPERFEVVYHLLSVTKNHRLRVRVSTDEATPVPS
IVPVWPVAGWLEREVFDMYGVLFAGNPDLRRILTDYGFQGHPQRKDFPLTGYIELRYSEEDKRVVYEPVKLAQDFRNFDF
LSPWEGADYVLPGDEKAGGTGEAPGKGAPTPMTAKEVKASDDKAKAAPPPTPKTTEKPADTGAGNKTNKAAAKPSKDGAK
AKPAAKAKTPATKKAEKAPARPRAPRKPKTGGDA
>Mature_274_residues
MLTHVFTVGEDSITVRREAIAGVMISLRDNLDYQQLMEIAGVDYPDRPERFEVVYHLLSVTKNHRLRVRVSTDEATPVPS
IVPVWPVAGWLEREVFDMYGVLFAGNPDLRRILTDYGFQGHPQRKDFPLTGYIELRYSEEDKRVVYEPVKLAQDFRNFDF
LSPWEGADYVLPGDEKAGGTGEAPGKGAPTPMTAKEVKASDDKAKAAPPPTPKTTEKPADTGAGNKTNKAAAKPSKDGAK
AKPAAKAKTPATKKAEKAPARPRAPRKPKTGGDA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0852

COG function: function code C; NADH:ubiquinone oxidoreductase 27 kD subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I 30 kDa subunit family [H]

Homologues:

Organism=Homo sapiens, GI4758788, Length=166, Percent_Identity=53.6144578313253, Blast_Score=190, Evalue=1e-48,
Organism=Escherichia coli, GI145693162, Length=104, Percent_Identity=37.5, Blast_Score=80, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71990788, Length=133, Percent_Identity=60.1503759398496, Blast_Score=171, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI32563621, Length=163, Percent_Identity=52.1472392638037, Blast_Score=171, Evalue=4e-43,
Organism=Drosophila melanogaster, GI24656494, Length=158, Percent_Identity=56.9620253164557, Blast_Score=190, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010218
- InterPro:   IPR001268
- ProDom:   PD001581 [H]

Pfam domain/function: PF00329 Complex1_30kDa [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 30025; Mature: 30025

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHVFTVGEDSITVRREAIAGVMISLRDNLDYQQLMEIAGVDYPDRPERFEVVYHLLSV
CCEEEEEECCCCEEHHHHHHHHHHEEHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TKNHRLRVRVSTDEATPVPSIVPVWPVAGWLEREVFDMYGVLFAGNPDLRRILTDYGFQG
CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCC
HPQRKDFPLTGYIELRYSEEDKRVVYEPVKLAQDFRNFDFLSPWEGADYVLPGDEKAGGT
CCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCC
GEAPGKGAPTPMTAKEVKASDDKAKAAPPPTPKTTEKPADTGAGNKTNKAAAKPSKDGAK
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKPAAKAKTPATKKAEKAPARPRAPRKPKTGGDA
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTHVFTVGEDSITVRREAIAGVMISLRDNLDYQQLMEIAGVDYPDRPERFEVVYHLLSV
CCEEEEEECCCCEEHHHHHHHHHHEEHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
TKNHRLRVRVSTDEATPVPSIVPVWPVAGWLEREVFDMYGVLFAGNPDLRRILTDYGFQG
CCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCC
HPQRKDFPLTGYIELRYSEEDKRVVYEPVKLAQDFRNFDFLSPWEGADYVLPGDEKAGGT
CCCCCCCCEEEEEEEEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCC
GEAPGKGAPTPMTAKEVKASDDKAKAAPPPTPKTTEKPADTGAGNKTNKAAAKPSKDGAK
CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AKPAAKAKTPATKKAEKAPARPRAPRKPKTGGDA
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA