Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486777

Identifier: 103486777

GI number: 103486777

Start: 1348822

End: 1351185

Strand: Direct

Name: 103486777

Synonym: Sala_1291

Alternate gene names: NA

Gene position: 1348822-1351185 (Clockwise)

Preceding gene: 103486774

Following gene: 103486798

Centisome position: 40.32

GC content: 68.02

Gene sequence:

>2364_bases
ATGACGGGGGAAAAGAAAATCGTCGGATTGTGGCGGGAATCCGCGGCAGGTCCGGAAGCAGACAGCGCCGCGCCGGTCGA
GGCCGCCGCGGCCGCTGCCGTATCCGCACCGGACGCGGAGGGCGCGGCGGGCGATCGCGACTGGCTGGACATGACGCCGC
TCGACGACGACGCCGAAGCCCGCATCGAGGGCGAAGCCGCGTCGGCATGGCGCGAGCGCGGCATACCGGCGCTCCTGATC
CTTCTTGCAGTGGGATGGACGGGATTCGCGCTCGGCGTCGCCACTGACGGCTTCGCACAAAGCCCGGCGATCGCCGACTG
GCCCGCGCATATTGCGACGATCGCGATGCCGCTTGCGCTGCTCGCGCTGCTCTGGATGCTCTGGCTGCGCTCGGGTCGGT
CGGAACAGGCGCGGTTCGCGCGCATCGCCGCGGCGCTGCGTGCCGAAAATCTGGCGCTGAATCAGTCGATGCACTCGCTC
GGCCTGCACCTCGCCGACGCGCAGAAGCAGCTTGGTGAACAGGCGCGGATCGTCCAGCAACTCGGCCTCGACACGGTGAT
GCGCCTTGCTGAAAGCAGCGACAAGCTCGCGAGCAACGCCGCGGTGATCGCCAATGCCCACGACCAGCTCGCTCGCTCGG
GCGATGTCGCGTTGCAACGGATGGACGGTCTGCTTGCCGGGCTGCCGCGGATCGACGATGTGGCGCAGCGGCTGGCGGTC
AATTTCCGCGAGGCGGGATTGGTGGCGCACCAGCAGGGCGCGAACCTCGAAGCCAGGCTCGCCGCGCTGGGCGAAGAGGC
GGCGCGGACGGCGCAGGCCGGTCAGGCTTCGACCGAAGCGATTCTCGAAGCGATTGTGGCGCTTCAGGAACAGACAAAGG
AAACCGAAAGCGGCCTGCTCGCCGCCTCGGCGGAGGTTAGCGGCGCGCATGACGCCGCACTGGCGCGCGTGACCGAGAGC
GCGGCGTCGGTGCGCCGCGCGATGGCCGACACGCTCGCTGCGCTCTCCGCGCAAAGCGAGGAGATCTGGCGCCAGTTTGG
CGAGAGCGTCGACGCCGCGGCCGCGCAGATGGACGCCAGGCTCGCGGCGGCGCGCGAGGCCGGCGACGCGATCGGGGCAC
AATTGTCGGAGCATGCCGATGCGAGCGACGCCCTCGCGGGGCGGATCGCCGCGCATGTCGCCGAGGTCGGCAAACAGCTG
GAGACGCTCAACGTCAACGTCGACGCCAGCACCGGCGTCGTCGGTCGCGCGATCGACGATACCAAAGCGCAGCTTGCGGC
CTTCATGGAGCAGGTGCAGAGCGGAAATGTTTCGGCGGCTCAACTCGTTTCGCACGCCGAATCGTTGTTGCTCGCGCTCG
ATGCGGTAACGCGGGAGCTTGACGAAACGCTGCCGCGCGCGCTCGACCGCATCGCCGGACACGGCAAGACGACACAATCC
GCCCTCGCCGAAATCCGTCCGCTGCTCGAAGCGTCCGAACTCGTCGCGCAATCGACGGTCTCGCACGTCCATGCCGTGCA
GGCGACGCTCCGGTCGAACGAGGAACAGATGACGGGTCAAGCGGCGAACCAGCAGGCGCTGGCCGACCGACTGAACGCCT
CGTTCGCCGAAGCCGAAGCATCGCTCGCGAAACTGCGCGACGGCGCCGAAGCCTTCAGCGAACAGGGCGGCGCGCGGATG
ATCGCGACGCTGGCCGAGGTTCGGGCAACCGCCGATTCGGCGGCCAACCAGGCGCGGCTGACGCTCGAACGGCTTGTCGA
TGGCGCGCGCGAGACGATGAAGGCAACCGCGAGCGAGGCGATCGACGCCGCCTTCCGGACCGAAATCATGGCGCAGCTCG
CCGCAATCGAGGATGCGTCGGCGCGCGCCGTCGCCGCGGCGAACAGCGCCGCCGACCGGCTGATGCGCCAGCTCGTCACG
ATCATGGACGCCAGCGAGAGTGTCGAACAGCGCGTGAGCGAGGCCGAACAGGCGATCGCCGCTTCCGACCGCGACACGCT
CGCCAAACAGGTCGGCGTGCTCACCGAAGCGCTCAAATCGACCGCGATCGACGTCACCAAGATATTGTCGAGCGAGGTCA
GCGACACCGCGTGGGACGCTTACCTCAAGGGCGACCGCGGCGTCTTTGCCCGCCGCGCGGTCAAGCTGGTCGAGAACAGC
GAGGTAAAGGAAATCCTGCGCCTCTATCAGAATGACGACGGCTTCCACGCCGCGGTCAATCAGTTCATCCATGATTTCGA
GGCGATGCTGCGCCTGCTGATCGGCGCACGCGACGGATCGGCGATCAGCGTGACCCTGCTGTCCTCCGATATCGGCAAGC
TGTATGTGGCGCTGGCGCAGGCGATCGACCGGCTGCGGAGTTAA

Upstream 100 bases:

>100_bases
ACCGGTCGAGGGGGCCGCTGTCGAACGACATTCCACAGCTTTGCCATCGGCGGGGTTAAGTTTCCGTTTCATGGCGGGCG
TTTGATGCTAAGATGGCGCG

Downstream 100 bases:

>100_bases
AGCAGGGCCTGCTTGGTCACGACGGGCCGTCCGCCGGATGGCGGGCCGGATGGCGGGGCGCCGAGGCTTTTCGCCCCTTT
GCCCAGGAATTGATAATCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; ATPase; Kinesin-Like Protein

Number of amino acids: Translated: 787; Mature: 786

Protein sequence:

>787_residues
MTGEKKIVGLWRESAAGPEADSAAPVEAAAAAAVSAPDAEGAAGDRDWLDMTPLDDDAEARIEGEAASAWRERGIPALLI
LLAVGWTGFALGVATDGFAQSPAIADWPAHIATIAMPLALLALLWMLWLRSGRSEQARFARIAAALRAENLALNQSMHSL
GLHLADAQKQLGEQARIVQQLGLDTVMRLAESSDKLASNAAVIANAHDQLARSGDVALQRMDGLLAGLPRIDDVAQRLAV
NFREAGLVAHQQGANLEARLAALGEEAARTAQAGQASTEAILEAIVALQEQTKETESGLLAASAEVSGAHDAALARVTES
AASVRRAMADTLAALSAQSEEIWRQFGESVDAAAAQMDARLAAAREAGDAIGAQLSEHADASDALAGRIAAHVAEVGKQL
ETLNVNVDASTGVVGRAIDDTKAQLAAFMEQVQSGNVSAAQLVSHAESLLLALDAVTRELDETLPRALDRIAGHGKTTQS
ALAEIRPLLEASELVAQSTVSHVHAVQATLRSNEEQMTGQAANQQALADRLNASFAEAEASLAKLRDGAEAFSEQGGARM
IATLAEVRATADSAANQARLTLERLVDGARETMKATASEAIDAAFRTEIMAQLAAIEDASARAVAAANSAADRLMRQLVT
IMDASESVEQRVSEAEQAIAASDRDTLAKQVGVLTEALKSTAIDVTKILSSEVSDTAWDAYLKGDRGVFARRAVKLVENS
EVKEILRLYQNDDGFHAAVNQFIHDFEAMLRLLIGARDGSAISVTLLSSDIGKLYVALAQAIDRLRS

Sequences:

>Translated_787_residues
MTGEKKIVGLWRESAAGPEADSAAPVEAAAAAAVSAPDAEGAAGDRDWLDMTPLDDDAEARIEGEAASAWRERGIPALLI
LLAVGWTGFALGVATDGFAQSPAIADWPAHIATIAMPLALLALLWMLWLRSGRSEQARFARIAAALRAENLALNQSMHSL
GLHLADAQKQLGEQARIVQQLGLDTVMRLAESSDKLASNAAVIANAHDQLARSGDVALQRMDGLLAGLPRIDDVAQRLAV
NFREAGLVAHQQGANLEARLAALGEEAARTAQAGQASTEAILEAIVALQEQTKETESGLLAASAEVSGAHDAALARVTES
AASVRRAMADTLAALSAQSEEIWRQFGESVDAAAAQMDARLAAAREAGDAIGAQLSEHADASDALAGRIAAHVAEVGKQL
ETLNVNVDASTGVVGRAIDDTKAQLAAFMEQVQSGNVSAAQLVSHAESLLLALDAVTRELDETLPRALDRIAGHGKTTQS
ALAEIRPLLEASELVAQSTVSHVHAVQATLRSNEEQMTGQAANQQALADRLNASFAEAEASLAKLRDGAEAFSEQGGARM
IATLAEVRATADSAANQARLTLERLVDGARETMKATASEAIDAAFRTEIMAQLAAIEDASARAVAAANSAADRLMRQLVT
IMDASESVEQRVSEAEQAIAASDRDTLAKQVGVLTEALKSTAIDVTKILSSEVSDTAWDAYLKGDRGVFARRAVKLVENS
EVKEILRLYQNDDGFHAAVNQFIHDFEAMLRLLIGARDGSAISVTLLSSDIGKLYVALAQAIDRLRS
>Mature_786_residues
TGEKKIVGLWRESAAGPEADSAAPVEAAAAAAVSAPDAEGAAGDRDWLDMTPLDDDAEARIEGEAASAWRERGIPALLIL
LAVGWTGFALGVATDGFAQSPAIADWPAHIATIAMPLALLALLWMLWLRSGRSEQARFARIAAALRAENLALNQSMHSLG
LHLADAQKQLGEQARIVQQLGLDTVMRLAESSDKLASNAAVIANAHDQLARSGDVALQRMDGLLAGLPRIDDVAQRLAVN
FREAGLVAHQQGANLEARLAALGEEAARTAQAGQASTEAILEAIVALQEQTKETESGLLAASAEVSGAHDAALARVTESA
ASVRRAMADTLAALSAQSEEIWRQFGESVDAAAAQMDARLAAAREAGDAIGAQLSEHADASDALAGRIAAHVAEVGKQLE
TLNVNVDASTGVVGRAIDDTKAQLAAFMEQVQSGNVSAAQLVSHAESLLLALDAVTRELDETLPRALDRIAGHGKTTQSA
LAEIRPLLEASELVAQSTVSHVHAVQATLRSNEEQMTGQAANQQALADRLNASFAEAEASLAKLRDGAEAFSEQGGARMI
ATLAEVRATADSAANQARLTLERLVDGARETMKATASEAIDAAFRTEIMAQLAAIEDASARAVAAANSAADRLMRQLVTI
MDASESVEQRVSEAEQAIAASDRDTLAKQVGVLTEALKSTAIDVTKILSSEVSDTAWDAYLKGDRGVFARRAVKLVENSE
VKEILRLYQNDDGFHAAVNQFIHDFEAMLRLLIGARDGSAISVTLLSSDIGKLYVALAQAIDRLRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82651; Mature: 82520

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEKKIVGLWRESAAGPEADSAAPVEAAAAAAVSAPDAEGAAGDRDWLDMTPLDDDAEA
CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RIEGEAASAWRERGIPALLILLAVGWTGFALGVATDGFAQSPAIADWPAHIATIAMPLAL
HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
LALLWMLWLRSGRSEQARFARIAAALRAENLALNQSMHSLGLHLADAQKQLGEQARIVQQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDTVMRLAESSDKLASNAAVIANAHDQLARSGDVALQRMDGLLAGLPRIDDVAQRLAV
HCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NFREAGLVAHQQGANLEARLAALGEEAARTAQAGQASTEAILEAIVALQEQTKETESGLL
HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCE
AASAEVSGAHDAALARVTESAASVRRAMADTLAALSAQSEEIWRQFGESVDAAAAQMDAR
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
LAAAREAGDAIGAQLSEHADASDALAGRIAAHVAEVGKQLETLNVNVDASTGVVGRAIDD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHH
TKAQLAAFMEQVQSGNVSAAQLVSHAESLLLALDAVTRELDETLPRALDRIAGHGKTTQS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALAEIRPLLEASELVAQSTVSHVHAVQATLRSNEEQMTGQAANQQALADRLNASFAEAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLAKLRDGAEAFSEQGGARMIATLAEVRATADSAANQARLTLERLVDGARETMKATASEA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAAFRTEIMAQLAAIEDASARAVAAANSAADRLMRQLVTIMDASESVEQRVSEAEQAIA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASDRDTLAKQVGVLTEALKSTAIDVTKILSSEVSDTAWDAYLKGDRGVFARRAVKLVENS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
EVKEILRLYQNDDGFHAAVNQFIHDFEAMLRLLIGARDGSAISVTLLSSDIGKLYVALAQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHH
AIDRLRS
HHHHHCC
>Mature Secondary Structure 
TGEKKIVGLWRESAAGPEADSAAPVEAAAAAAVSAPDAEGAAGDRDWLDMTPLDDDAEA
CCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
RIEGEAASAWRERGIPALLILLAVGWTGFALGVATDGFAQSPAIADWPAHIATIAMPLAL
HCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
LALLWMLWLRSGRSEQARFARIAAALRAENLALNQSMHSLGLHLADAQKQLGEQARIVQQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDTVMRLAESSDKLASNAAVIANAHDQLARSGDVALQRMDGLLAGLPRIDDVAQRLAV
HCHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
NFREAGLVAHQQGANLEARLAALGEEAARTAQAGQASTEAILEAIVALQEQTKETESGLL
HHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCE
AASAEVSGAHDAALARVTESAASVRRAMADTLAALSAQSEEIWRQFGESVDAAAAQMDAR
EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHH
LAAAREAGDAIGAQLSEHADASDALAGRIAAHVAEVGKQLETLNVNVDASTGVVGRAIDD
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHH
TKAQLAAFMEQVQSGNVSAAQLVSHAESLLLALDAVTRELDETLPRALDRIAGHGKTTQS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ALAEIRPLLEASELVAQSTVSHVHAVQATLRSNEEQMTGQAANQQALADRLNASFAEAEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
SLAKLRDGAEAFSEQGGARMIATLAEVRATADSAANQARLTLERLVDGARETMKATASEA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IDAAFRTEIMAQLAAIEDASARAVAAANSAADRLMRQLVTIMDASESVEQRVSEAEQAIA
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASDRDTLAKQVGVLTEALKSTAIDVTKILSSEVSDTAWDAYLKGDRGVFARRAVKLVENS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCH
EVKEILRLYQNDDGFHAAVNQFIHDFEAMLRLLIGARDGSAISVTLLSSDIGKLYVALAQ
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHH
AIDRLRS
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA