| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is nasA [H]
Identifier: 103486750
GI number: 103486750
Start: 1317017
End: 1318252
Strand: Direct
Name: nasA [H]
Synonym: Sala_1264
Alternate gene names: 103486750
Gene position: 1317017-1318252 (Clockwise)
Preceding gene: 103486749
Following gene: 103486751
Centisome position: 39.37
GC content: 67.48
Gene sequence:
>1236_bases ATGACGACTGCAAGCGCGGGGGCCGGAGCGGCCCCCAAATCGAGTTTCTGGGCGAGCGGGCACTGGCCGACGCTCGTCGC CGCCTTTCTCTATTTCGATCTCGCCTTCATGGTGTGGGTAATCCTCGGCCCGCTGGCGCCCGCGATTTCGGCCGACCTCG GCCTGACCCCCGCGCAAAAGGGGTTGATGGTCGCAGTCCCCACGCTCGCCGGGGCGCTGCTCCGCGTCGTCAACGGCCTG CTCGTCGATCGCATCGGCCCCAAGCGCGCCGGGGCGATCAGCCAGGTGATCGTAATCGCCGGGCTGTTCACCGCCTGGTT GATGGGGGTGACCAGCTTCACCGGCACGCTCGCGCTCGGCGTGGTGCTCGGCTTCGCCGGGGCCAGCTTTGCGATTGCGC TGCCGCTCGCGAGCCGCTGGTATCCGCCCGAGCATCAGGGCAAGGCGATGGGGCTCGCCGGGATGGGCAATTCGGGCACC GTGCTCGCAGCGCTGTTCGCCCCCGGCCTCGCGGTGATGTTCGGCTGGAACGCGGTGCTCGGCCTCGCCTGCATCCCGCT GGCGATCGTCTTTTTCCTCTATTCGTTCATGGCAAAAGACGCGCCGAACGCTCCTGCGCCCAAGAAGCTGGTCGACTATT TCCAGCCGCTCAAGACCGCTGATGCCTGGTGGCTGATGGCCTTTTATTCGGTGACTTTCGGGGGCTTCGTCGGGCTGGCC GCATCGCTGCCGATCTATTTCACCGACCAGTTCCATCTGAGCCCCGTGATGGCGGGCTATTGCACCGCCGCCTGCGTCTT TGCCGGGTCGTTGGTGCGGCCGATGGGCGGCGCGCTCGCCGACCGGATCGGCGGGGTCAAGGCGCTGATGATGGTCTTTG TCGTCGCGGCGCTAGCGCTCGCCGGGGTGCCGCAGGCGGACACCCTCGCCGCCGCGCTCGGCCTGTTCGTGATCGCGATG CTCGCGCTCGGCACGGGGAATGGCTCGGTGTTCCAGCTCGTGCCGCAGCGTTTTTCGGCCGAGATCGGGGTGATGACCGG GCTGGTCGGCATGGCGGGCGGCATCGGCGGCTTCTACCTCGCCTCCTCGCTCGGCTTTGCCAAGCAGTGGAGCGGCAGCT TTGCGCCGGGCTTCTATATCTTCGCCGGGCTTGCCGTTGCCGCGCTCATCGCCCTGATGTTTGTCAAGAATCAGTGGCGC GCAACCTGGGGCGCCGCCGAAGGCGTACGGATCTAG
Upstream 100 bases:
>100_bases TTTTCCACATTCCGACATGGCAATGAAGCCGTCAGGATGCGCCCGCGCGGCCGCCGTCCTGGCGGCTTTTTTATTGCCCG TCGCACGAAGGGGACGGACG
Downstream 100 bases:
>100_bases CCATGACCCGCACCCTCATCCTTTTGCTGGCGCTCGCGCCGGCCGGGGCGGCACATGCCCAGGCCGTCGAGCTAGAGCCG GTTGGCGAAGCCCGCCTCCG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTTASAGAGAAPKSSFWASGHWPTLVAAFLYFDLAFMVWVILGPLAPAISADLGLTPAQKGLMVAVPTLAGALLRVVNGL LVDRIGPKRAGAISQVIVIAGLFTAWLMGVTSFTGTLALGVVLGFAGASFAIALPLASRWYPPEHQGKAMGLAGMGNSGT VLAALFAPGLAVMFGWNAVLGLACIPLAIVFFLYSFMAKDAPNAPAPKKLVDYFQPLKTADAWWLMAFYSVTFGGFVGLA ASLPIYFTDQFHLSPVMAGYCTAACVFAGSLVRPMGGALADRIGGVKALMMVFVVAALALAGVPQADTLAAALGLFVIAM LALGTGNGSVFQLVPQRFSAEIGVMTGLVGMAGGIGGFYLASSLGFAKQWSGSFAPGFYIFAGLAVAALIALMFVKNQWR ATWGAAEGVRI
Sequences:
>Translated_411_residues MTTASAGAGAAPKSSFWASGHWPTLVAAFLYFDLAFMVWVILGPLAPAISADLGLTPAQKGLMVAVPTLAGALLRVVNGL LVDRIGPKRAGAISQVIVIAGLFTAWLMGVTSFTGTLALGVVLGFAGASFAIALPLASRWYPPEHQGKAMGLAGMGNSGT VLAALFAPGLAVMFGWNAVLGLACIPLAIVFFLYSFMAKDAPNAPAPKKLVDYFQPLKTADAWWLMAFYSVTFGGFVGLA ASLPIYFTDQFHLSPVMAGYCTAACVFAGSLVRPMGGALADRIGGVKALMMVFVVAALALAGVPQADTLAAALGLFVIAM LALGTGNGSVFQLVPQRFSAEIGVMTGLVGMAGGIGGFYLASSLGFAKQWSGSFAPGFYIFAGLAVAALIALMFVKNQWR ATWGAAEGVRI >Mature_410_residues TTASAGAGAAPKSSFWASGHWPTLVAAFLYFDLAFMVWVILGPLAPAISADLGLTPAQKGLMVAVPTLAGALLRVVNGLL VDRIGPKRAGAISQVIVIAGLFTAWLMGVTSFTGTLALGVVLGFAGASFAIALPLASRWYPPEHQGKAMGLAGMGNSGTV LAALFAPGLAVMFGWNAVLGLACIPLAIVFFLYSFMAKDAPNAPAPKKLVDYFQPLKTADAWWLMAFYSVTFGGFVGLAA SLPIYFTDQFHLSPVMAGYCTAACVFAGSLVRPMGGALADRIGGVKALMMVFVVAALALAGVPQADTLAAALGLFVIAML ALGTGNGSVFQLVPQRFSAEIGVMTGLVGMAGGIGGFYLASSLGFAKQWSGSFAPGFYIFAGLAVAALIALMFVKNQWRA TWGAAEGVRI
Specific function: May function as a nitrate transporter [H]
COG id: COG2223
COG function: function code P; Nitrate/nitrite transporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family [H]
Homologues:
Organism=Escherichia coli, GI1787475, Length=394, Percent_Identity=26.3959390862944, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1787743, Length=396, Percent_Identity=25.2525252525253, Blast_Score=66, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004737 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42325; Mature: 42193
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTASAGAGAAPKSSFWASGHWPTLVAAFLYFDLAFMVWVILGPLAPAISADLGLTPAQK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLMVAVPTLAGALLRVVNGLLVDRIGPKRAGAISQVIVIAGLFTAWLMGVTSFTGTLALG CCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLGFAGASFAIALPLASRWYPPEHQGKAMGLAGMGNSGTVLAALFAPGLAVMFGWNAVL HHHHHCCCHHHEEEHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHH GLACIPLAIVFFLYSFMAKDAPNAPAPKKLVDYFQPLKTADAWWLMAFYSVTFGGFVGLA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLPIYFTDQFHLSPVMAGYCTAACVFAGSLVRPMGGALADRIGGVKALMMVFVVAALAL HCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVPQADTLAAALGLFVIAMLALGTGNGSVFQLVPQRFSAEIGVMTGLVGMAGGIGGFYL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASSLGFAKQWSGSFAPGFYIFAGLAVAALIALMFVKNQWRATWGAAEGVRI HHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTASAGAGAAPKSSFWASGHWPTLVAAFLYFDLAFMVWVILGPLAPAISADLGLTPAQK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GLMVAVPTLAGALLRVVNGLLVDRIGPKRAGAISQVIVIAGLFTAWLMGVTSFTGTLALG CCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLGFAGASFAIALPLASRWYPPEHQGKAMGLAGMGNSGTVLAALFAPGLAVMFGWNAVL HHHHHCCCHHHEEEHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHCHHHHHHHHHHHH GLACIPLAIVFFLYSFMAKDAPNAPAPKKLVDYFQPLKTADAWWLMAFYSVTFGGFVGLA HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASLPIYFTDQFHLSPVMAGYCTAACVFAGSLVRPMGGALADRIGGVKALMMVFVVAALAL HCCCEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVPQADTLAAALGLFVIAMLALGTGNGSVFQLVPQRFSAEIGVMTGLVGMAGGIGGFYL CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH ASSLGFAKQWSGSFAPGFYIFAGLAVAALIALMFVKNQWRATWGAAEGVRI HHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7868621; 8969502; 9384377 [H]