Click here to switch to the map view.

The map label for this gene is 103486716

Identifier: 103486716

GI number: 103486716

Start: 1277280

End: 1277813

Strand: Direct

Name: 103486716

Synonym: Sala_1229

Alternate gene names: NA

Gene position: 1277280-1277813 (Clockwise)

Preceding gene: 103486714

Following gene: 103486717

Centisome position: 38.18

GC content: 61.24

Gene sequence:

>534_bases
ATGGCGAAGTCCAAAGGGACGGCCGACGACGATGTCGTCACGATCAAGAAATACGCCAACCGGCGGCTCTATGACACCGA
ACGCAGCTGTTACATCACGCTCGACGATCTGGGTGCGATGGTGCGCGACGGGCGCGAGTTTCGCGTCGTCGATGCCAAGA
GCGGCGAGGATATTACGCACAATGTGCTGACGCAGATCATCATGGACACCGAAACGCGCGGCGAAACGCTGTTGCCGGTG
CCTTTTCTGCGCCAGCTGATCGGCATGTACGGCGACAAGATGCAGGCGATGGTCCCGCAATATCTGGAAGCGTCGATGGC
GGCGTTCCGCAAGAACCAGCAGGACGTCCGCGCGGCGTTCGAAGGGGCGCTGGGCGCCAATCCGCTTGCCGAACTGACCC
GGCGCAACATGGAAATGTTCCAGCAGGCCGCGGGCGCTTTCATTCCGGGGGCGGGCAAGGCAAAGGATGCCGAAATCGCG
GCGCTGAAGGCCGAAGTGGCCGAACTCAGGGCCGAGCTTGCAAAAAAGAAATAG

Upstream 100 bases:

>100_bases
GCCACATGTTGCGATGCATCATTATTTGGTGCTAATGCCCAGGCTTGTCCGGACCGGCGCGGTCGCCACGAAACCGGAAT
GCACAGGAGCTGAAGCCATC

Downstream 100 bases:

>100_bases
GCGGGACGTCGTTCCGCACCCGAGCATAGAAACAGGACCGATGATCAAACATGCGCTCAGCGTAACCCGTCAGGCCGACT
TCGCGGCCTGGTATCAGGAC

Product: polyhydroxyalkonate synthesis repressor, PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAKSKGTADDDVVTIKKYANRRLYDTERSCYITLDDLGAMVRDGREFRVVDAKSGEDITHNVLTQIIMDTETRGETLLPV
PFLRQLIGMYGDKMQAMVPQYLEASMAAFRKNQQDVRAAFEGALGANPLAELTRRNMEMFQQAAGAFIPGAGKAKDAEIA
ALKAEVAELRAELAKKK

Sequences:

>Translated_177_residues
MAKSKGTADDDVVTIKKYANRRLYDTERSCYITLDDLGAMVRDGREFRVVDAKSGEDITHNVLTQIIMDTETRGETLLPV
PFLRQLIGMYGDKMQAMVPQYLEASMAAFRKNQQDVRAAFEGALGANPLAELTRRNMEMFQQAAGAFIPGAGKAKDAEIA
ALKAEVAELRAELAKKK
>Mature_176_residues
AKSKGTADDDVVTIKKYANRRLYDTERSCYITLDDLGAMVRDGREFRVVDAKSGEDITHNVLTQIIMDTETRGETLLPVP
FLRQLIGMYGDKMQAMVPQYLEASMAAFRKNQQDVRAAFEGALGANPLAELTRRNMEMFQQAAGAFIPGAGKAKDAEIAA
LKAEVAELRAELAKKK

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 19577; Mature: 19446

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSKGTADDDVVTIKKYANRRLYDTERSCYITLDDLGAMVRDGREFRVVDAKSGEDITH
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCHHH
NVLTQIIMDTETRGETLLPVPFLRQLIGMYGDKMQAMVPQYLEASMAAFRKNQQDVRAAF
HHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EGALGANPLAELTRRNMEMFQQAAGAFIPGAGKAKDAEIAALKAEVAELRAELAKKK
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKSKGTADDDVVTIKKYANRRLYDTERSCYITLDDLGAMVRDGREFRVVDAKSGEDITH
CCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCHHH
NVLTQIIMDTETRGETLLPVPFLRQLIGMYGDKMQAMVPQYLEASMAAFRKNQQDVRAAF
HHHHHHHHCCCCCCCEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHH
EGALGANPLAELTRRNMEMFQQAAGAFIPGAGKAKDAEIAALKAEVAELRAELAKKK
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7763384 [H]