Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486676

Identifier: 103486676

GI number: 103486676

Start: 1228453

End: 1229184

Strand: Direct

Name: 103486676

Synonym: Sala_1188

Alternate gene names: NA

Gene position: 1228453-1229184 (Clockwise)

Preceding gene: 103486675

Following gene: 103486677

Centisome position: 36.72

GC content: 66.8

Gene sequence:

>732_bases
ATGAGCGAGGCGTGGCACCAACTGGGCGAGCCGCGCGCCGACGGCATATTGTTGATCGGGGATCATGCGTCGGCGTATGT
CCCGAACGACATCGACCTGGGCATCGCCCCCGCGCTGCTGACCACCCATATCGCGATCGACATCGGCGTGGCCGAGGTCG
CGGCGCTGCTGGTCGAAAGCGGCGTGGTCGATGCCGCAATTCTCGGCGGTGTGTCGCGGCTGGTCGTCGATCTGAACCGC
GAGGAAGAGGCGCCGGGCGTGCTGCCGATCGCAAGCGACGGCCATGCGGTGCCGGGCAATGCGCTGGACGATGCGGCGCG
CGAGGCGCGGCTGGCGCGCTTTTACCGGCCCTATCACGATCATATCGCGGCGACGATCGCGAAGCACCCGCCCGCAATGA
TCCTGTCGCTGCACAGCTTCACCCCGTCGCTGTCGGCGCATCCCGGTCAGGCGCGGCCGTGGCACGTCGGGGTGCTCTAC
AACGAGGACGATCGCCTTGTTGCCACTGCGATCGCCGCGCTGGAGGCCGAAGGGCTGCTCGTCGGCGACCAGCAACCCTA
TTCGGGCAAGGCGCTCAACGCGACGATGAATCGCCACGCCGAAGCGAACGGCATTCCCTATATCGGCATCGAGATGCGAC
AGGATCTGGTCGGCGACGCGGCGGGGCAGGCGCTGTTCGCCGAGCGGCTGGCGCGAATGTGCAGGAAAGTGACATTGAAC
ATCGGGGAATAG

Upstream 100 bases:

>100_bases
CCTGCTTCGCGCTGTTCGATGCGGCGGCCGACCGCGACGCGGCAAAGGCAGTGCTCGCCGCACGGCATCCGGGATGGTGG
CTGATGGCAGGCGCGCTGCG

Downstream 100 bases:

>100_bases
GCGTGTAGAGGCGCATCTTGCCTCTAGTTTTTGAAACAAAATTATCAGGATTGAGTGAAATGCCTTCTTATCGTTCGCGC
ACCACAACCCATGGCCGCAA

Product: N-formylglutamate amidohydrolase

Products: formate; L-glutamate

Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MSEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVESGVVDAAILGGVSRLVVDLNR
EEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHDHIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLY
NEDDRLVATAIAALEAEGLLVGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN
IGE

Sequences:

>Translated_243_residues
MSEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVESGVVDAAILGGVSRLVVDLNR
EEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHDHIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLY
NEDDRLVATAIAALEAEGLLVGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN
IGE
>Mature_242_residues
SEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVESGVVDAAILGGVSRLVVDLNRE
EEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHDHIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLYN
EDDRLVATAIAALEAEGLLVGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLNI
GE

Specific function: Unknown

COG id: COG3931

COG function: function code E; Predicted N-formylglutamate amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.1.68

Molecular weight: Translated: 25754; Mature: 25622

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVES
CCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHC
GVVDAAILGGVSRLVVDLNREEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHD
CCHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHH
HIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLYNEDDRLVATAIAALEAEGLL
HHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEE
VGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN
ECCCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
IGE
CCC
>Mature Secondary Structure 
SEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVES
CHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHC
GVVDAAILGGVSRLVVDLNREEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHD
CCHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHH
HIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLYNEDDRLVATAIAALEAEGLL
HHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEE
VGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN
ECCCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
IGE
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-formyl-L-glutamate; H2O

Specific reaction: N-formyl-L-glutamate + H2O = formate + L-glutamate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA