| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486676
Identifier: 103486676
GI number: 103486676
Start: 1228453
End: 1229184
Strand: Direct
Name: 103486676
Synonym: Sala_1188
Alternate gene names: NA
Gene position: 1228453-1229184 (Clockwise)
Preceding gene: 103486675
Following gene: 103486677
Centisome position: 36.72
GC content: 66.8
Gene sequence:
>732_bases ATGAGCGAGGCGTGGCACCAACTGGGCGAGCCGCGCGCCGACGGCATATTGTTGATCGGGGATCATGCGTCGGCGTATGT CCCGAACGACATCGACCTGGGCATCGCCCCCGCGCTGCTGACCACCCATATCGCGATCGACATCGGCGTGGCCGAGGTCG CGGCGCTGCTGGTCGAAAGCGGCGTGGTCGATGCCGCAATTCTCGGCGGTGTGTCGCGGCTGGTCGTCGATCTGAACCGC GAGGAAGAGGCGCCGGGCGTGCTGCCGATCGCAAGCGACGGCCATGCGGTGCCGGGCAATGCGCTGGACGATGCGGCGCG CGAGGCGCGGCTGGCGCGCTTTTACCGGCCCTATCACGATCATATCGCGGCGACGATCGCGAAGCACCCGCCCGCAATGA TCCTGTCGCTGCACAGCTTCACCCCGTCGCTGTCGGCGCATCCCGGTCAGGCGCGGCCGTGGCACGTCGGGGTGCTCTAC AACGAGGACGATCGCCTTGTTGCCACTGCGATCGCCGCGCTGGAGGCCGAAGGGCTGCTCGTCGGCGACCAGCAACCCTA TTCGGGCAAGGCGCTCAACGCGACGATGAATCGCCACGCCGAAGCGAACGGCATTCCCTATATCGGCATCGAGATGCGAC AGGATCTGGTCGGCGACGCGGCGGGGCAGGCGCTGTTCGCCGAGCGGCTGGCGCGAATGTGCAGGAAAGTGACATTGAAC ATCGGGGAATAG
Upstream 100 bases:
>100_bases CCTGCTTCGCGCTGTTCGATGCGGCGGCCGACCGCGACGCGGCAAAGGCAGTGCTCGCCGCACGGCATCCGGGATGGTGG CTGATGGCAGGCGCGCTGCG
Downstream 100 bases:
>100_bases GCGTGTAGAGGCGCATCTTGCCTCTAGTTTTTGAAACAAAATTATCAGGATTGAGTGAAATGCCTTCTTATCGTTCGCGC ACCACAACCCATGGCCGCAA
Product: N-formylglutamate amidohydrolase
Products: formate; L-glutamate
Alternate protein names: N-Formylglutamate Amidohydrolase Family Protein; N-Formylglutamate Amidohydrolase Protein; N-Formylglutamate Amidohydrolase Superfamily; Cytoplasmic Protein; Hydrolase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MSEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVESGVVDAAILGGVSRLVVDLNR EEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHDHIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLY NEDDRLVATAIAALEAEGLLVGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN IGE
Sequences:
>Translated_243_residues MSEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVESGVVDAAILGGVSRLVVDLNR EEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHDHIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLY NEDDRLVATAIAALEAEGLLVGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN IGE >Mature_242_residues SEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVESGVVDAAILGGVSRLVVDLNRE EEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHDHIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLYN EDDRLVATAIAALEAEGLLVGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLNI GE
Specific function: Unknown
COG id: COG3931
COG function: function code E; Predicted N-formylglutamate amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.68
Molecular weight: Translated: 25754; Mature: 25622
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVES CCHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHC GVVDAAILGGVSRLVVDLNREEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHD CCHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHH HIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLYNEDDRLVATAIAALEAEGLL HHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEE VGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN ECCCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC IGE CCC >Mature Secondary Structure SEAWHQLGEPRADGILLIGDHASAYVPNDIDLGIAPALLTTHIAIDIGVAEVAALLVES CHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHC GVVDAAILGGVSRLVVDLNREEEAPGVLPIASDGHAVPGNALDDAAREARLARFYRPYHD CCHHHHHHHHHHHEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCHHHH HIAATIAKHPPAMILSLHSFTPSLSAHPGQARPWHVGVLYNEDDRLVATAIAALEAEGLL HHHHHHHCCCCEEEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCEE VGDQQPYSGKALNATMNRHAEANGIPYIGIEMRQDLVGDAAGQALFAERLARMCRKVTLN ECCCCCCCCCEEHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC IGE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N-formyl-L-glutamate; H2O
Specific reaction: N-formyl-L-glutamate + H2O = formate + L-glutamate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA