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The map label for this gene is 103486639

Identifier: 103486639

GI number: 103486639

Start: 1186832

End: 1187554

Strand: Direct

Name: 103486639

Synonym: Sala_1151

Alternate gene names: NA

Gene position: 1186832-1187554 (Clockwise)

Preceding gene: 103486638

Following gene: 103486640

Centisome position: 35.48

GC content: 69.29

Gene sequence:

>723_bases
TTGCGCTGGCTTAGTGCCGCCGCGTTGACGCTGATGCCCGTCGCGGCGCAGGCGCAGGCGCTAGCCTGCTCGGTGCCCGA
TCGGATTCCCGTGCCGCGCCTCGAACAGCCGCGCCGGGGCGAACCCGTGCGGCGGCCGCCGGTCACCGGCTATCTGCTGG
CCATGAGCTGGTCGCCGCAGCATTGCGCCGGCGTCCGCGATCCAAAGGGCGCGCGCGACGCTTTTCAATGTTCGGGCGAA
CATGGCCGCTTCGGCTGGGTGCTGCACGGGCTGTGGCCCGAAAGCGACGATGCGGATTATCCGCAATGGTGTCGCCCGGC
GAAGATCGTGCCGCAGCCGGTGCTGAAAAAACATCTGTGCATGACGCCGTCGGTGCAGTTGCTCCAGCACGAATGGGCGA
AGCACGGGACGTGCATGAGCCGGCACCCCGCCGCCTATTTCCGCGCCGCCGGGCTGTTGTTCCGCGCGGTGCGCTTTCCC
GACATGCGGGCGCTGGCGTCGCGGCGGCAGACCGCGGGCAGCGTGCGCCGCGCCTTTGCCGCGATCAATCGGGGCGTCAC
CCCGGCGATGATCGCCGTGACGTCCGACCGCCAGGGATGGCTGAAAGAGGTGCGATTGTGCCTGGGGCCGCGCATGAAGC
CGACGCCATGCAAATCCTTTCAGATCGGCGTCAGGGATGGCCGCGCGCTGCGCATTCGTCCTATGCCGGAGCCCCGGCGC
TGA

Upstream 100 bases:

>100_bases
CGGCTCGACACGATCCGCGCGATCGCCGAAACGGGCGTCACCTATGTATCGGTCGGGCGCCTAACCCAGTCGGCGCCCGC
GGCCGACATCGGGCTCGATT

Downstream 100 bases:

>100_bases
ACGCGCAGAAACGTCCCGCTTCGGGACGGCGCGGCCGTTAACGCTCTTTTAACCTTATCGACTCGTTAAGATCGTCCTAG
CTTCGGGCGCATGGACTCGA

Product: ribonuclease T2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MRWLSAAALTLMPVAAQAQALACSVPDRIPVPRLEQPRRGEPVRRPPVTGYLLAMSWSPQHCAGVRDPKGARDAFQCSGE
HGRFGWVLHGLWPESDDADYPQWCRPAKIVPQPVLKKHLCMTPSVQLLQHEWAKHGTCMSRHPAAYFRAAGLLFRAVRFP
DMRALASRRQTAGSVRRAFAAINRGVTPAMIAVTSDRQGWLKEVRLCLGPRMKPTPCKSFQIGVRDGRALRIRPMPEPRR

Sequences:

>Translated_240_residues
MRWLSAAALTLMPVAAQAQALACSVPDRIPVPRLEQPRRGEPVRRPPVTGYLLAMSWSPQHCAGVRDPKGARDAFQCSGE
HGRFGWVLHGLWPESDDADYPQWCRPAKIVPQPVLKKHLCMTPSVQLLQHEWAKHGTCMSRHPAAYFRAAGLLFRAVRFP
DMRALASRRQTAGSVRRAFAAINRGVTPAMIAVTSDRQGWLKEVRLCLGPRMKPTPCKSFQIGVRDGRALRIRPMPEPRR
>Mature_240_residues
MRWLSAAALTLMPVAAQAQALACSVPDRIPVPRLEQPRRGEPVRRPPVTGYLLAMSWSPQHCAGVRDPKGARDAFQCSGE
HGRFGWVLHGLWPESDDADYPQWCRPAKIVPQPVLKKHLCMTPSVQLLQHEWAKHGTCMSRHPAAYFRAAGLLFRAVRFP
DMRALASRRQTAGSVRRAFAAINRGVTPAMIAVTSDRQGWLKEVRLCLGPRMKPTPCKSFQIGVRDGRALRIRPMPEPRR

Specific function: Unknown

COG id: COG3719

COG function: function code J; Ribonuclease I

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNase T2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001568
- InterPro:   IPR018188 [H]

Pfam domain/function: PF00445 Ribonuclease_T2 [H]

EC number: NA

Molecular weight: Translated: 26894; Mature: 26894

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS00530 RNASE_T2_1 ; PS00531 RNASE_T2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLSAAALTLMPVAAQAQALACSVPDRIPVPRLEQPRRGEPVRRPPVTGYLLAMSWSPQ
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
HCAGVRDPKGARDAFQCSGEHGRFGWVLHGLWPESDDADYPQWCRPAKIVPQPVLKKHLC
HHCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHC
MTPSVQLLQHEWAKHGTCMSRHPAAYFRAAGLLFRAVRFPDMRALASRRQTAGSVRRAFA
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AINRGVTPAMIAVTSDRQGWLKEVRLCLGPRMKPTPCKSFQIGVRDGRALRIRPMPEPRR
HHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRWLSAAALTLMPVAAQAQALACSVPDRIPVPRLEQPRRGEPVRRPPVTGYLLAMSWSPQ
CCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCH
HCAGVRDPKGARDAFQCSGEHGRFGWVLHGLWPESDDADYPQWCRPAKIVPQPVLKKHLC
HHCCCCCCCCCCHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHCCCCCCCCHHHHHHHHC
MTPSVQLLQHEWAKHGTCMSRHPAAYFRAAGLLFRAVRFPDMRALASRRQTAGSVRRAFA
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
AINRGVTPAMIAVTSDRQGWLKEVRLCLGPRMKPTPCKSFQIGVRDGRALRIRPMPEPRR
HHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]