Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486590

Identifier: 103486590

GI number: 103486590

Start: 1131537

End: 1131980

Strand: Direct

Name: 103486590

Synonym: Sala_1101

Alternate gene names: NA

Gene position: 1131537-1131980 (Clockwise)

Preceding gene: 103486589

Following gene: 103486591

Centisome position: 33.83

GC content: 66.89

Gene sequence:

>444_bases
ATGACAGTTTCGACCCGAGTTTCGCGGTTTGCCCGACCAATCGCCCTGACTGGTGTGACCCTGGCGCGCGGGGAGCGCGG
CGCCGCCATCGTCGAAATGGCGTTGGTGCTGCCGCTGCTCCTTGCGTTGCTGATGGGCATCCTGGTCTATGGGCATTATT
TCATGCTCGCGCATAATGTGCAGCAGGCGGCGAACGACGGCGCGCGCGCGGCGATCGTCGGGCTCGATGCCGCCGACCGA
CGCGCCGTCGCCGAGCGCGCGGTGGCGCGCAGCATCGATCCGGCGGCGGGAACGCACAGCGTCGCCGTGTCCGAAACCGC
CGATGCGATCACCGTCGCCGTTACCTTCACTGCGGCCGACGACTCCTTTCTGCGATCCAGCTTCGTGCCGTCGCCCGATC
ATGTGATCCGCGCGCGAGCGACCTTCGAGCTGCCGGTTGATTGA

Upstream 100 bases:

>100_bases
TTGCGCCGTTCGTCGCGGGCTGAACTTTGTGTAAATTGTGTAAAATCGGCGACGAGGCTGCTCGACGCCGATTTTACATC
GCGCGGGCAAACTGCCTGCC

Downstream 100 bases:

>100_bases
GCATGGCTATCCGCTCGCGTCTCGCATCGCTGATCCGCTGCCGCCGCGCGGGAATCAGCATCGCTGCGGCGATCGGTATG
CCGATGCTGATCGGCGCGGC

Product: TadE-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTVSTRVSRFARPIALTGVTLARGERGAAIVEMALVLPLLLALLMGILVYGHYFMLAHNVQQAANDGARAAIVGLDAADR
RAVAERAVARSIDPAAGTHSVAVSETADAITVAVTFTAADDSFLRSSFVPSPDHVIRARATFELPVD

Sequences:

>Translated_147_residues
MTVSTRVSRFARPIALTGVTLARGERGAAIVEMALVLPLLLALLMGILVYGHYFMLAHNVQQAANDGARAAIVGLDAADR
RAVAERAVARSIDPAAGTHSVAVSETADAITVAVTFTAADDSFLRSSFVPSPDHVIRARATFELPVD
>Mature_146_residues
TVSTRVSRFARPIALTGVTLARGERGAAIVEMALVLPLLLALLMGILVYGHYFMLAHNVQQAANDGARAAIVGLDAADRR
AVAERAVARSIDPAAGTHSVAVSETADAITVAVTFTAADDSFLRSSFVPSPDHVIRARATFELPVD

Specific function: Unknown

COG id: COG4961

COG function: function code U; Flp pilus assembly protein TadG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15454; Mature: 15323

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSTRVSRFARPIALTGVTLARGERGAAIVEMALVLPLLLALLMGILVYGHYFMLAHNV
CCCHHHHHHHHCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAANDGARAAIVGLDAADRRAVAERAVARSIDPAAGTHSVAVSETADAITVAVTFTAAD
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEEEECC
DSFLRSSFVPSPDHVIRARATFELPVD
CHHHHHCCCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure 
TVSTRVSRFARPIALTGVTLARGERGAAIVEMALVLPLLLALLMGILVYGHYFMLAHNV
CCHHHHHHHHCCHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QQAANDGARAAIVGLDAADRRAVAERAVARSIDPAAGTHSVAVSETADAITVAVTFTAAD
HHHHCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEEEEEECC
DSFLRSSFVPSPDHVIRARATFELPVD
CHHHHHCCCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA