| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486569
Identifier: 103486569
GI number: 103486569
Start: 1109831
End: 1110097
Strand: Reverse
Name: 103486569
Synonym: Sala_1080
Alternate gene names: NA
Gene position: 1110097-1109831 (Counterclockwise)
Preceding gene: 103486570
Following gene: 103486559
Centisome position: 33.19
GC content: 61.42
Gene sequence:
>267_bases TTGGGGTGGGGTGCGGACGTTCCTCTCTTTCCGTTCGTGTCGAGCGAAGTCGAGACACCCATCGGCGCTAATCCTAGCCA GAGGGGCATCTCGACTTCGCTCGATGCGAACGGGTTAGGGAAAGGCGGCAAAGGAAACTATCGGTCGTTTCCAGCCATAA CACCCCGGCGAAACCGCCCACGGCAAATCGCCCGCGGAAATCCGCGGGCGCTCTGTTTTTGGCAAGGCCGGAGCGATCAC CCCTTGGCGATGCTCGCGATGGCCTGA
Upstream 100 bases:
>100_bases AGCGAAGTCAATGTCGGCATGGTGAAAATGCTCCAGCTCGTCCACAGCATCTCGCCCGCGCTGGCACGGCGGATCATGAT CCGGTTTTGACTGGGCGGCT
Downstream 100 bases:
>100_bases TCGACCAGCGCCTTGTCGGCGGCAACGTCATGCCTGTCGGCGATCAGCTTCGCGGCCGCTTCGGTCGCGGCCTTCACGGC CGCCGCGCGGACTTCGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MGWGADVPLFPFVSSEVETPIGANPSQRGISTSLDANGLGKGGKGNYRSFPAITPRRNRPRQIARGNPRALCFWQGRSDH PLAMLAMA
Sequences:
>Translated_88_residues MGWGADVPLFPFVSSEVETPIGANPSQRGISTSLDANGLGKGGKGNYRSFPAITPRRNRPRQIARGNPRALCFWQGRSDH PLAMLAMA >Mature_87_residues GWGADVPLFPFVSSEVETPIGANPSQRGISTSLDANGLGKGGKGNYRSFPAITPRRNRPRQIARGNPRALCFWQGRSDHP LAMLAMA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9480; Mature: 9349
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGWGADVPLFPFVSSEVETPIGANPSQRGISTSLDANGLGKGGKGNYRSFPAITPRRNRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RQIARGNPRALCFWQGRSDHPLAMLAMA CCCCCCCCCEEEEECCCCCCCEEEEEEC >Mature Secondary Structure GWGADVPLFPFVSSEVETPIGANPSQRGISTSLDANGLGKGGKGNYRSFPAITPRRNRP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RQIARGNPRALCFWQGRSDHPLAMLAMA CCCCCCCCCEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA