Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486556

Identifier: 103486556

GI number: 103486556

Start: 1099862

End: 1100275

Strand: Reverse

Name: 103486556

Synonym: Sala_1067

Alternate gene names: NA

Gene position: 1100275-1099862 (Counterclockwise)

Preceding gene: 103486557

Following gene: 103486555

Centisome position: 32.89

GC content: 68.84

Gene sequence:

>414_bases
GTGGAATCGCCGCGCAATCTGTCATACTGTCCGCGCCGGACCGACGAGGGAGAAGACGACGTGGGCATCCTGCGAACGAT
CATCTGGGTGGTGCTGACCGCGGTGCTGGTCATCTTCGCGATGGCGAACTGGCAGGTTGTCACCGTGACGATCTGGCCGG
GCTGGGAGGCGGAGACCAAGCTGCCCGTCGTCATCCTCGCCGCCTTCCTGATCGGCGCGGTGCCGATGTGGATTGCGCTG
CGCACGACACGCTGGTCGCTGAAACGCCGCCTCGACGCCATCGAGCGGCAGGCCGCCGACCTGCGCGCGCTCGCGCACCG
CCCCGTCGAACCGGCGCCCGCGCCCTCGGCCACGGCACCGGTCAACGACATTCCCCCTGCCCCCACCGACCTTTTCGCCC
CGGACAAGCCATGA

Upstream 100 bases:

>100_bases
CTGTCGGCCGATCAACTCACGGAACTTTTCGACCTCGACTATCATATGAAGCATGTGGACACGATCTTCGACCGGGTGTT
CGGCGCCGCCTAGCGACAGG

Downstream 100 bases:

>100_bases
CTTCGCCCATCTATCTCGCCATCGACACCCCGCATCTCGACGCCGCTCTGACGCTGGCGCAAAAGGTGCGGCATCATGTC
GGCGGGCTGAAGCTGGGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MESPRNLSYCPRRTDEGEDDVGILRTIIWVVLTAVLVIFAMANWQVVTVTIWPGWEAETKLPVVILAAFLIGAVPMWIAL
RTTRWSLKRRLDAIERQAADLRALAHRPVEPAPAPSATAPVNDIPPAPTDLFAPDKP

Sequences:

>Translated_137_residues
MESPRNLSYCPRRTDEGEDDVGILRTIIWVVLTAVLVIFAMANWQVVTVTIWPGWEAETKLPVVILAAFLIGAVPMWIAL
RTTRWSLKRRLDAIERQAADLRALAHRPVEPAPAPSATAPVNDIPPAPTDLFAPDKP
>Mature_137_residues
MESPRNLSYCPRRTDEGEDDVGILRTIIWVVLTAVLVIFAMANWQVVTVTIWPGWEAETKLPVVILAAFLIGAVPMWIAL
RTTRWSLKRRLDAIERQAADLRALAHRPVEPAPAPSATAPVNDIPPAPTDLFAPDKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15186; Mature: 15186

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESPRNLSYCPRRTDEGEDDVGILRTIIWVVLTAVLVIFAMANWQVVTVTIWPGWEAETK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
LPVVILAAFLIGAVPMWIALRTTRWSLKRRLDAIERQAADLRALAHRPVEPAPAPSATAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VNDIPPAPTDLFAPDKP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MESPRNLSYCPRRTDEGEDDVGILRTIIWVVLTAVLVIFAMANWQVVTVTIWPGWEAETK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCC
LPVVILAAFLIGAVPMWIALRTTRWSLKRRLDAIERQAADLRALAHRPVEPAPAPSATAP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
VNDIPPAPTDLFAPDKP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA