| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486548
Identifier: 103486548
GI number: 103486548
Start: 1091838
End: 1092275
Strand: Direct
Name: 103486548
Synonym: Sala_1059
Alternate gene names: NA
Gene position: 1091838-1092275 (Clockwise)
Preceding gene: 103486545
Following gene: 103486549
Centisome position: 32.64
GC content: 68.49
Gene sequence:
>438_bases ATGCTCTTTGGTCCGCGTCCTTCCTGCATCAAGCGGCTGCTGGTCATCGAGGATGACCCGCTGACGGCGTTCGACAATGA GCATACGCTGAAGCACGCGGGCTATGACGTCGTCGCGACGGTCGATTCGGGCGAGGCGGCGGTGCGTTTTATCGCGGCGG AACAGATCGATGCGCTGGTGCTCGACCTCGGCCTCGCTGGCGATATGACCGGGCGCGACGTCGCGCGGCTGGCGCGCGAC CGCGGCATCGCCGTGCTGCTGGTCACCGGTCGATGCCCCGAGGACGCAAGCGACATCGCCATGGCCTGCCTCGACAAGCC GCACAGCCCGTCGGCGCTGGTCGCCGCGCTGAAGGCGCTCGAAACGATGATCTGCAAGAATCGGGCGCCGCGCAAGGTCG CGGGCCTGACGACCTGGTGGCGCCCCGCCGCGGCCTGA
Upstream 100 bases:
>100_bases CACGCTCATAGCCGGAAAAGTGTCGCTTCGTCGATGGCAAGCAGAAGCGATATTGCACGACGCGGCGGAGCGAGCCATGG CGCATCGAAAGGGAGATTGC
Downstream 100 bases:
>100_bases GCACGGCAGACCGGTGGGCGGGTCAATTACCCGCTTCCAATTTGGCAGGGAGGCTTTAGGCCCGTGACCTGGGTGCTGCG CCGGTCCTCGGCCGCGCCGG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver Protein
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALVLDLGLAGDMTGRDVARLARD RGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKALETMICKNRAPRKVAGLTTWWRPAAA
Sequences:
>Translated_145_residues MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALVLDLGLAGDMTGRDVARLARD RGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKALETMICKNRAPRKVAGLTTWWRPAAA >Mature_145_residues MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALVLDLGLAGDMTGRDVARLARD RGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKALETMICKNRAPRKVAGLTTWWRPAAA
Specific function: Unknown
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15505; Mature: 15505
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALV CCCCCCHHHHHEEHEECCCCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH LDLGLAGDMTGRDVARLARDRGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKAL HHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH ETMICKNRAPRKVAGLTTWWRPAAA HHHHHCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MLFGPRPSCIKRLLVIEDDPLTAFDNEHTLKHAGYDVVATVDSGEAAVRFIAAEQIDALV CCCCCCHHHHHEEHEECCCCCCCCCCCCCHHHCCCEEEEEECCCCHHHHHHHHHHHHHHH LDLGLAGDMTGRDVARLARDRGIAVLLVTGRCPEDASDIAMACLDKPHSPSALVAALKAL HHHCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCHHHHHHHHHH ETMICKNRAPRKVAGLTTWWRPAAA HHHHHCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA