Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is fpr [H]

Identifier: 103486521

GI number: 103486521

Start: 1067504

End: 1068319

Strand: Direct

Name: fpr [H]

Synonym: Sala_1032

Alternate gene names: 103486521

Gene position: 1067504-1068319 (Clockwise)

Preceding gene: 103486518

Following gene: 103486522

Centisome position: 31.91

GC content: 65.81

Gene sequence:

>816_bases
ATGAGTAACCGTATTGCCGCCGCCGCCAAACTTGCCCCCTCCGCCTCGTTGACCGTCGAGAACGTGCGGTCGGTGCGGCA
CTGGAACGAGCATCTGTTCAGCTTCACGATCACGCGGCCGCCGAGCTTTCGTTTCCGGTCGGGTGAGTTTGTGATGATCG
GGCTGCCGGGTGAGGGGCGGCCGCTGCTGCGCGCCTATTCGATCGCCAGCCCCGCCTATGCCGACGAGCTGGAGTTCCTG
TCGATCAAGGTGCCTGATGGTCCGCTGACCTCGCGGCTCCAGCTGATCCAGCCGGGCGATCCGGTCTATCTCGGCCGCAA
GCCGACGGGGACGCTCGTTGCCGATGCGCTGCTTCCCGGCCAGCGGCTGTTCCTGCTGTCGACGGGTACGGGGCTGGCGC
CCTTCCTGAGTCTGGTGCGCGATCCCGATATTTACGAGCGGTTCAGCCAGATCCAGCTTGTCCATTGCGTCCGGCAGGTG
AGCGACCTGGCATTCCGCGATGCGCTGGAAAGCCAGCTCGCGGGCGATCCGCTGGTGCAGGACCAGGCGCTGCTGCAATT
CCATTACCTGCCGACAGTGACGCGCGAGCCGTTCCGCACCACGGGGCGTATAGATGCGCTGATCGACGGCGGGCAGCTCT
TTGGCCATCCGCTGACCGGCCCTGCGCATTTCGACCCCGCGACCGACCGCGTGATGATGTGCGGCAGCATGGCGATGATC
CGCGACTTCGAGGCGCGCTTCGAGGCGCTGGGCTTCAGGGAAGGGTCGAACGCCGCGCCGGGCGATTTTGTGATCGAACG
GGCCTTCGTGGGCTAA

Upstream 100 bases:

>100_bases
TTGGACCTGACGCCGGGATTTCGCTTGGGTGAAACCCGGACGCCGGTGCGCTGCGACATCGCGCGCGACCGGTGCGACGA
CCATCAGGAAAGCCGAGACA

Downstream 100 bases:

>100_bases
GCGGCCTGGCTCCCCCCTTGCGCGGGGCGCGGCTTTCGCGCAATCCGACGTCGGGAGAGAGGAGCCGGCGTGACGAGGAT
CGACGACAATCCGCCGGGGG

Product: oxidoreductase FAD/NAD(P)-binding

Products: NA

Alternate protein names: FNR; Protein X [H]

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSNRIAAAAKLAPSASLTVENVRSVRHWNEHLFSFTITRPPSFRFRSGEFVMIGLPGEGRPLLRAYSIASPAYADELEFL
SIKVPDGPLTSRLQLIQPGDPVYLGRKPTGTLVADALLPGQRLFLLSTGTGLAPFLSLVRDPDIYERFSQIQLVHCVRQV
SDLAFRDALESQLAGDPLVQDQALLQFHYLPTVTREPFRTTGRIDALIDGGQLFGHPLTGPAHFDPATDRVMMCGSMAMI
RDFEARFEALGFREGSNAAPGDFVIERAFVG

Sequences:

>Translated_271_residues
MSNRIAAAAKLAPSASLTVENVRSVRHWNEHLFSFTITRPPSFRFRSGEFVMIGLPGEGRPLLRAYSIASPAYADELEFL
SIKVPDGPLTSRLQLIQPGDPVYLGRKPTGTLVADALLPGQRLFLLSTGTGLAPFLSLVRDPDIYERFSQIQLVHCVRQV
SDLAFRDALESQLAGDPLVQDQALLQFHYLPTVTREPFRTTGRIDALIDGGQLFGHPLTGPAHFDPATDRVMMCGSMAMI
RDFEARFEALGFREGSNAAPGDFVIERAFVG
>Mature_270_residues
SNRIAAAAKLAPSASLTVENVRSVRHWNEHLFSFTITRPPSFRFRSGEFVMIGLPGEGRPLLRAYSIASPAYADELEFLS
IKVPDGPLTSRLQLIQPGDPVYLGRKPTGTLVADALLPGQRLFLLSTGTGLAPFLSLVRDPDIYERFSQIQLVHCVRQVS
DLAFRDALESQLAGDPLVQDQALLQFHYLPTVTREPFRTTGRIDALIDGGQLFGHPLTGPAHFDPATDRVMMCGSMAMIR
DFEARFEALGFREGSNAAPGDFVIERAFVG

Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1790359, Length=238, Percent_Identity=32.7731092436975, Blast_Score=117, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017927
- InterPro:   IPR001709
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 29800; Mature: 29668

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRIAAAAKLAPSASLTVENVRSVRHWNEHLFSFTITRPPSFRFRSGEFVMIGLPGEGR
CCCCHHHHHHCCCCCCEEHHHHHHHHHHHHCEEEEEEECCCCCEECCCCEEEEEECCCCC
PLLRAYSIASPAYADELEFLSIKVPDGPLTSRLQLIQPGDPVYLGRKPTGTLVADALLPG
HHHEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHCCC
QRLFLLSTGTGLAPFLSLVRDPDIYERFSQIQLVHCVRQVSDLAFRDALESQLAGDPLVQ
CEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DQALLQFHYLPTVTREPFRTTGRIDALIDGGQLFGHPLTGPAHFDPATDRVMMCGSMAMI
HHHHHEEECCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCHHHHHCCHHHH
RDFEARFEALGFREGSNAAPGDFVIERAFVG
HHHHHHHHHHCCCCCCCCCCCHHEEEEECCC
>Mature Secondary Structure 
SNRIAAAAKLAPSASLTVENVRSVRHWNEHLFSFTITRPPSFRFRSGEFVMIGLPGEGR
CCCHHHHHHCCCCCCEEHHHHHHHHHHHHCEEEEEEECCCCCEECCCCEEEEEECCCCC
PLLRAYSIASPAYADELEFLSIKVPDGPLTSRLQLIQPGDPVYLGRKPTGTLVADALLPG
HHHEEECCCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCEEECCCCCCHHHHHHHCCC
QRLFLLSTGTGLAPFLSLVRDPDIYERFSQIQLVHCVRQVSDLAFRDALESQLAGDPLVQ
CEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DQALLQFHYLPTVTREPFRTTGRIDALIDGGQLFGHPLTGPAHFDPATDRVMMCGSMAMI
HHHHHEEECCCCCCCCCCCCCCCEEEEEECCHHCCCCCCCCCCCCCCCCHHHHHCCHHHH
RDFEARFEALGFREGSNAAPGDFVIERAFVG
HHHHHHHHHHCCCCCCCCCCCHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7673160; 8034707; 9865948 [H]