Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486435

Identifier: 103486435

GI number: 103486435

Start: 965238

End: 966263

Strand: Reverse

Name: 103486435

Synonym: Sala_0945

Alternate gene names: NA

Gene position: 966263-965238 (Counterclockwise)

Preceding gene: 103486436

Following gene: 103486433

Centisome position: 28.89

GC content: 65.79

Gene sequence:

>1026_bases
ATGCGCAAGGCAATGATGTTTGGTCTTTTGGCGGTTGGTCTCGCGGGATGCGGATCGGGCGGCGACACGGCCGCCGATGC
CGGGGCCGGTGACAAGGGCGGGTCCACGGCGGCGGCCAAGGCAACCCCCGACGAGGTGCCGGACAGCAAGTTCGACGCCC
GTCTTTACAGCGTTGCCGAAGCGATGGACATGAGCGTTTTCGGGCTCAAGTTCGACATGACGATCGACGAGGTGCGCGCC
GTCCTGACCGAACAGGGGTTTGCCATCCCCAGCGACTATGCCGACCGGGGCGACCCCCGCGTGCGCGGCCGCTCGCTTGA
CCTGGGACTGGGGCCGCGCGCCGACAAATCGCCCGGCACGCGGCAGGAAATGAATTATAACTGGTTCCGGATGCCCGACG
GCGTCGACATCGAAACGCCGAGCCACTTGCGCCCGCGCAACACCGAAACCATCGCACCCTGGTTCTATGTCGATGCGAAT
GGCGTCCAGCGCCTGTTCTCGGTCCACTACCGCCGCGGTTTCGACCCCAGCGTCGATCCCCGCGCCTATGCCGCCACGCT
GGAAAAGCGGCTGGGCGAGCCGAGCAAGGCCAATCGGAAACCGGGCAATGTCATGGCCTTTTATTATGTTCAGGCGCCAG
TGCCCAAGGGATATGAAGCCGACGTCGACGATCGCGAGACGTTCGAGATGGATCGTCAGCACCCGATCAAGGCGAGCCGC
AGCTACTGCCTGTCGGAAATGCGCCGCGACGTCGCCAGGGAACCGTCGCGCGAATGCGCGGCGGTGTTCGCGGGCGATGC
CGCCGGTCAGCGGCTGTTTTCGGCGCTCAATGCGCGGCGCAAGGGCCATCCCTTTTCGCAAGTGCTCGAGTTTCAGGTGC
TGGAAAGCGGCATGCGGCTCGAGTTCCGCGCCGAATGGCTCCCGGAGGTGATACAGAGCGCGCAAAGCGAGCAAAGGCTC
CGCGCCGAGATCGCGGCACGCAAGGCGCGCGCCAGCCAACCGGCCGCCGCGCCCGAAGGGCTTTGA

Upstream 100 bases:

>100_bases
GAAAGGAAAAATGGCCGAAATAGGCCAGTTTAGGGTTGACCCCCAGCGGATACAGCGGCCAACATGCCCCTATCCAGACA
ATTTGATAAGGGGGGGCTCG

Downstream 100 bases:

>100_bases
TCGTTAAGATTCGGCGGTCCCAAGGGATTCTCGTGCCTCAATCCCCGGCGAAATCGAACGCGCTCACCCCGCGCTCGCCG
TCGCGGAACCGCAGCGGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRKAMMFGLLAVGLAGCGSGGDTAADAGAGDKGGSTAAAKATPDEVPDSKFDARLYSVAEAMDMSVFGLKFDMTIDEVRA
VLTEQGFAIPSDYADRGDPRVRGRSLDLGLGPRADKSPGTRQEMNYNWFRMPDGVDIETPSHLRPRNTETIAPWFYVDAN
GVQRLFSVHYRRGFDPSVDPRAYAATLEKRLGEPSKANRKPGNVMAFYYVQAPVPKGYEADVDDRETFEMDRQHPIKASR
SYCLSEMRRDVAREPSRECAAVFAGDAAGQRLFSALNARRKGHPFSQVLEFQVLESGMRLEFRAEWLPEVIQSAQSEQRL
RAEIAARKARASQPAAAPEGL

Sequences:

>Translated_341_residues
MRKAMMFGLLAVGLAGCGSGGDTAADAGAGDKGGSTAAAKATPDEVPDSKFDARLYSVAEAMDMSVFGLKFDMTIDEVRA
VLTEQGFAIPSDYADRGDPRVRGRSLDLGLGPRADKSPGTRQEMNYNWFRMPDGVDIETPSHLRPRNTETIAPWFYVDAN
GVQRLFSVHYRRGFDPSVDPRAYAATLEKRLGEPSKANRKPGNVMAFYYVQAPVPKGYEADVDDRETFEMDRQHPIKASR
SYCLSEMRRDVAREPSRECAAVFAGDAAGQRLFSALNARRKGHPFSQVLEFQVLESGMRLEFRAEWLPEVIQSAQSEQRL
RAEIAARKARASQPAAAPEGL
>Mature_341_residues
MRKAMMFGLLAVGLAGCGSGGDTAADAGAGDKGGSTAAAKATPDEVPDSKFDARLYSVAEAMDMSVFGLKFDMTIDEVRA
VLTEQGFAIPSDYADRGDPRVRGRSLDLGLGPRADKSPGTRQEMNYNWFRMPDGVDIETPSHLRPRNTETIAPWFYVDAN
GVQRLFSVHYRRGFDPSVDPRAYAATLEKRLGEPSKANRKPGNVMAFYYVQAPVPKGYEADVDDRETFEMDRQHPIKASR
SYCLSEMRRDVAREPSRECAAVFAGDAAGQRLFSALNARRKGHPFSQVLEFQVLESGMRLEFRAEWLPEVIQSAQSEQRL
RAEIAARKARASQPAAAPEGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37551; Mature: 37551

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKAMMFGLLAVGLAGCGSGGDTAADAGAGDKGGSTAAAKATPDEVPDSKFDARLYSVAE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AMDMSVFGLKFDMTIDEVRAVLTEQGFAIPSDYADRGDPRVRGRSLDLGLGPRADKSPGT
HHCCHHEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
RQEMNYNWFRMPDGVDIETPSHLRPRNTETIAPWFYVDANGVQRLFSVHYRRGFDPSVDP
HHHCCCCEEECCCCCCCCCCCCCCCCCCCEECCEEEECCHHHHHHHHHHHHCCCCCCCCH
RAYAATLEKRLGEPSKANRKPGNVMAFYYVQAPVPKGYEADVDDRETFEMDRQHPIKASR
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCHHHH
SYCLSEMRRDVAREPSRECAAVFAGDAAGQRLFSALNARRKGHPFSQVLEFQVLESGMRL
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE
EFRAEWLPEVIQSAQSEQRLRAEIAARKARASQPAAAPEGL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRKAMMFGLLAVGLAGCGSGGDTAADAGAGDKGGSTAAAKATPDEVPDSKFDARLYSVAE
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
AMDMSVFGLKFDMTIDEVRAVLTEQGFAIPSDYADRGDPRVRGRSLDLGLGPRADKSPGT
HHCCHHEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
RQEMNYNWFRMPDGVDIETPSHLRPRNTETIAPWFYVDANGVQRLFSVHYRRGFDPSVDP
HHHCCCCEEECCCCCCCCCCCCCCCCCCCEECCEEEECCHHHHHHHHHHHHCCCCCCCCH
RAYAATLEKRLGEPSKANRKPGNVMAFYYVQAPVPKGYEADVDDRETFEMDRQHPIKASR
HHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCHHHH
SYCLSEMRRDVAREPSRECAAVFAGDAAGQRLFSALNARRKGHPFSQVLEFQVLESGMRL
HHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE
EFRAEWLPEVIQSAQSEQRLRAEIAARKARASQPAAAPEGL
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA