| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is trpG [H]
Identifier: 103486327
GI number: 103486327
Start: 842997
End: 843587
Strand: Reverse
Name: trpG [H]
Synonym: Sala_0837
Alternate gene names: 103486327
Gene position: 843587-842997 (Counterclockwise)
Preceding gene: 103486328
Following gene: 103486326
Centisome position: 25.22
GC content: 64.97
Gene sequence:
>591_bases ATGATCCTCGTCATCGACAATTATGACAGCTTCACCTTCAATCTCGTTCATTATCTGATCGAGCTGGGGGCCGAGGTGCG CGTCGAGCGCAACGATGCGCTCACCGCGGCGCAGGCGCTCGCAACCGGCGCCGATGCGATCCTCATCTCGCCCGGCCCCT GCACGCCGAACGAAGCGGGGATCAGCCTCGACCTTGTCGCCGCCTGTGCCGATGCGGAACGACCGCTGCTCGGCGTCTGC CTCGGTCATCAGGCGATCGGCCAGCATTTCGGCGGCACGGTGCAGCGCGGCCATCTGATGCACGGCAAGACCTCGCCCGT CTGCCACGACGGCAGCGGGCTTTACGCGGGCCTCCCTTCGCCCTTTCAGGCGACGCGCTATCACAGCCTGGAGGTCGTCG ACATTCCGCCCAGCCTGATCATCAACGCGACGAGCGACGATGGCGCGGTGATGGGCTTCCGCCATGCCGAACTGCCGATC CATGGTGTCCAGTTCCACCCCGAAAGCATCGCGACCGAGCATGGCCATGCGATGCTCGCCAATTTCCTCCGTATCGCCGG GATTCCCGTGCGCGAACGGCAAGCGGCATGA
Upstream 100 bases:
>100_bases ACGCCGCGACCTGAGCCTGCCGCGCCGCGCAAAGCTGGCTTTCGCGCGGGCAAAGCTTCTATCCCTTCCCCCGTCCCCGC AAAATCGTTAGGGCGCGCGC
Downstream 100 bases:
>100_bases GCCGGTTCGGGCCATTTCCCGACCCTTCGGCGCTGCTCGACCATGACGAGGCGGCGCACGCCTTCGCAACGATGCTCGAT GGCGGTGCGCGCGACGAACA
Product: glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase
Products: NA
Alternate protein names: Anthranilate synthase component II; Glutamine amido-transferase [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAGISLDLVAACADAERPLLGVC LGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPSPFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPI HGVQFHPESIATEHGHAMLANFLRIAGIPVRERQAA
Sequences:
>Translated_196_residues MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAGISLDLVAACADAERPLLGVC LGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPSPFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPI HGVQFHPESIATEHGHAMLANFLRIAGIPVRERQAA >Mature_196_residues MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAGISLDLVAACADAERPLLGVC LGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPSPFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPI HGVQFHPESIATEHGHAMLANFLRIAGIPVRERQAA
Specific function: Participates in the tryptophan-dependent indole-3-acetic acid production, which is a phytohormone released by A.brasilense [H]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=186, Percent_Identity=56.4516129032258, Blast_Score=206, Evalue=6e-55, Organism=Escherichia coli, GI1787517, Length=189, Percent_Identity=44.4444444444444, Blast_Score=137, Evalue=6e-34, Organism=Saccharomyces cerevisiae, GI6322638, Length=199, Percent_Identity=42.713567839196, Blast_Score=172, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6324361, Length=214, Percent_Identity=31.7757009345794, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 20785; Mature: 20785
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAG CEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCC ISLDLVAACADAERPLLGVCLGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPS CEEEEEEECCCCCCCEEEEECCHHHHHHHCCCCCCCCEEECCCCCCCEECCCCEEECCCC PFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPIHGVQFHPESIATEHGHAMLA CCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECCCCEECEEECCHHHCCCCCHHHHH NFLRIAGIPVRERQAA HHHHHCCCCCHHCCCC >Mature Secondary Structure MILVIDNYDSFTFNLVHYLIELGAEVRVERNDALTAAQALATGADAILISPGPCTPNEAG CEEEEECCCCHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCEEEECCCCCCCCCCC ISLDLVAACADAERPLLGVCLGHQAIGQHFGGTVQRGHLMHGKTSPVCHDGSGLYAGLPS CEEEEEEECCCCCCCEEEEECCHHHHHHHCCCCCCCCEEECCCCCCCEECCCCEEECCCC PFQATRYHSLEVVDIPPSLIINATSDDGAVMGFRHAELPIHGVQFHPESIATEHGHAMLA CCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEEECCCCEECEEECCHHHCCCCCHHHHH NFLRIAGIPVRERQAA HHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1896020 [H]