| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486266
Identifier: 103486266
GI number: 103486266
Start: 780895
End: 781818
Strand: Direct
Name: 103486266
Synonym: Sala_0774
Alternate gene names: NA
Gene position: 780895-781818 (Clockwise)
Preceding gene: 103486258
Following gene: 103486267
Centisome position: 23.34
GC content: 66.88
Gene sequence:
>924_bases GTGCCTGCGAAACCAAGGGGACAATCGATTCTGGCCAGAGACGACATCCGCCGCGAATGGGCCGATCATTATTGGTGGTC GCAGGACGGCGTCCGGCTGCACGCGCGCGTCTATCCCGCGGTTGATGCAAGTGAAAGCTCCCCGCCGATCCTGTGTATGC CAGGACTGGCGCGCAACGCGCGCGATTTCGAGGATTTGGCCCCGCATCTCGCGCAGCGGCGCCAGGTTATCGTGATCGAG TTTCGCGGTCGCGGCGAGAGCGCCTATGCCAGGGATCCGATGACCTATGTGCCGCTCACCTATGTGCAGGATGTCGTGGC GCTGCTGGACGATTTGGGCATTGCGCGCTTTGCGACGATCGGCACCTCGCTCGGCGGACTGGTGTCGATGCTGATGGCGG CGAGCCTGCCGGGGCGGATCGTCGGCGCGGTGCTCAACGATGTCGGACCCGAATTGCAGACCGCGGGGCTGGATCGCATC CGCGATTATATCGGCGCGGGCGGCAGTCAGCCGACATGGATGCACGCGGCGCGCGCCTTTGCCGAACTCAACGGCGCCAT CTATCCGAACTATGGCATTCACGACTGGCTGCGGCTCACCAAGCGCACGCACAAGCTGACCCCCGAAGGGCGGATCGTTA CCGATTATGACAAGCAGATCGCGGCGCCGCTGCGGGTGCCGAACGGCGGCGACGCGGGCCTCGACCTGTGGCCCGCCTAT CGCGCGCTCGGCGCGGTGCCGCTGCTGATCCTGCGCGGTGCGCTGTCGGACATACTGGCGCGCAGTGCGGCGGAAAAAAT GGCTGCCGAACTGCCCGGCGCGCGCTTCGTCGAGGTGCCGGGCGTCGGCCACGCACCGACGCTGGACGAGCCCGAAGCCC GCACCGCGATCGACGCATGGATGGCGGAGTTGCCGCGCGCGTGA
Upstream 100 bases:
>100_bases CGTGCGGCGGCAACCGCCACGGGCGTCTTCGCGACGGATGGCTTGCGCCGATGCGCCGGGTTGGCGATAGACGGGCGCGA CTCCCGCATTGCATGAGCGG
Downstream 100 bases:
>100_bases ACGCCGACCCACCCGAAAGATTGCGGCCGGTTCATATCCTGCACCTTCATTCGAGCTTCGCGCTCGGCGGCAAGGAGGCG CGCGCGGTCCGCCTGATGAA
Product: alpha/beta hydrolase fold
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Family Protein; Hydrolases Or Acyltransferases; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Cation Diffusion Facilitator Family Transporter; 3-Oxoadipate Enol-Lactonase; Peroxidase BpoB; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Hydrolase / Acyltransferase; Prolyl Aminopetidase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPAKPRGQSILARDDIRREWADHYWWSQDGVRLHARVYPAVDASESSPPILCMPGLARNARDFEDLAPHLAQRRQVIVIE FRGRGESAYARDPMTYVPLTYVQDVVALLDDLGIARFATIGTSLGGLVSMLMAASLPGRIVGAVLNDVGPELQTAGLDRI RDYIGAGGSQPTWMHAARAFAELNGAIYPNYGIHDWLRLTKRTHKLTPEGRIVTDYDKQIAAPLRVPNGGDAGLDLWPAY RALGAVPLLILRGALSDILARSAAEKMAAELPGARFVEVPGVGHAPTLDEPEARTAIDAWMAELPRA
Sequences:
>Translated_307_residues MPAKPRGQSILARDDIRREWADHYWWSQDGVRLHARVYPAVDASESSPPILCMPGLARNARDFEDLAPHLAQRRQVIVIE FRGRGESAYARDPMTYVPLTYVQDVVALLDDLGIARFATIGTSLGGLVSMLMAASLPGRIVGAVLNDVGPELQTAGLDRI RDYIGAGGSQPTWMHAARAFAELNGAIYPNYGIHDWLRLTKRTHKLTPEGRIVTDYDKQIAAPLRVPNGGDAGLDLWPAY RALGAVPLLILRGALSDILARSAAEKMAAELPGARFVEVPGVGHAPTLDEPEARTAIDAWMAELPRA >Mature_306_residues PAKPRGQSILARDDIRREWADHYWWSQDGVRLHARVYPAVDASESSPPILCMPGLARNARDFEDLAPHLAQRRQVIVIEF RGRGESAYARDPMTYVPLTYVQDVVALLDDLGIARFATIGTSLGGLVSMLMAASLPGRIVGAVLNDVGPELQTAGLDRIR DYIGAGGSQPTWMHAARAFAELNGAIYPNYGIHDWLRLTKRTHKLTPEGRIVTDYDKQIAAPLRVPNGGDAGLDLWPAYR ALGAVPLLILRGALSDILARSAAEKMAAELPGARFVEVPGVGHAPTLDEPEARTAIDAWMAELPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33453; Mature: 33321
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKPRGQSILARDDIRREWADHYWWSQDGVRLHARVYPAVDASESSPPILCMPGLARNA CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCC RDFEDLAPHLAQRRQVIVIEFRGRGESAYARDPMTYVPLTYVQDVVALLDDLGIARFATI CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH GTSLGGLVSMLMAASLPGRIVGAVLNDVGPELQTAGLDRIRDYIGAGGSQPTWMHAARAF HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AELNGAIYPNYGIHDWLRLTKRTHKLTPEGRIVTDYDKQIAAPLRVPNGGDAGLDLWPAY HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCCCCCCCCHHHHHH RALGAVPLLILRGALSDILARSAAEKMAAELPGARFVEVPGVGHAPTLDEPEARTAIDAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHH MAELPRA HHHCCCC >Mature Secondary Structure PAKPRGQSILARDDIRREWADHYWWSQDGVRLHARVYPAVDASESSPPILCMPGLARNA CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCC RDFEDLAPHLAQRRQVIVIEFRGRGESAYARDPMTYVPLTYVQDVVALLDDLGIARFATI CCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH GTSLGGLVSMLMAASLPGRIVGAVLNDVGPELQTAGLDRIRDYIGAGGSQPTWMHAARAF HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH AELNGAIYPNYGIHDWLRLTKRTHKLTPEGRIVTDYDKQIAAPLRVPNGGDAGLDLWPAY HHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCHHHHHCCCCCCCCCCCCCHHHHHH RALGAVPLLILRGALSDILARSAAEKMAAELPGARFVEVPGVGHAPTLDEPEARTAIDAW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHH MAELPRA HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA