| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486267
Identifier: 103486267
GI number: 103486267
Start: 781815
End: 782987
Strand: Direct
Name: 103486267
Synonym: Sala_0775
Alternate gene names: NA
Gene position: 781815-782987 (Clockwise)
Preceding gene: 103486266
Following gene: 103486268
Centisome position: 23.37
GC content: 66.92
Gene sequence:
>1173_bases GTGAACGCCGACCCACCCGAAAGATTGCGGCCGGTTCATATCCTGCACCTTCATTCGAGCTTCGCGCTCGGCGGCAAGGA GGCGCGCGCGGTCCGCCTGATGAACCTGATGCGCGCGCGTGCGGCGCACACGATATTGTCCGCTGTTCCGGGCGCGCTCG GCGCGCGTGACGCCATCGATTCCGGCATTGACGTGGACTTTCCCGCCGACGCGCCGCCGCTTCACGGAAAGCCGGGGCTG ATCCGATACGGCAGGCTTGCGCATTACATGGGCCGCTTCGACCTTGTGCTCACCTATAATTGGGGGGCGATGGACGGAGT AATGGCCCATCGTTTGTGGGCGCCGTTCATGCGCCTGCCGCCGCTGATCCATCACGAGGACGGCTTCAACGAGGATGAAA GCATCCGGCGCGATTGGAAGCGGAACCTCTTTCGCCGCCTTGCGCTGCCGACCGTAGAGGCGCTCGCGGTACCCTCCGCC CTGCTGGAGCGCATCGCGGCCGACGAATGGGGCGCCCGCGAACGGACGGTGGTGATCCGCAACGGCATCGATACGGCATC CTACGAGGCTCCGCCTTCTGTCGCGATTCCGGGGCTGGAACGCCGTCCGGGCGATGTGGTGATCGGGACCATCGCCGGGC TGCGCAAGGTCAAGGATCTGCCGCGGCTGGTCCGCGCGGTCGCCACCCTGCCACCGAATGTCCGGCTGGTCATCGTTGGC GAAGGCCCCGAACGCGACGCGATCAGGGCGGCGGCGGCGACGTGCGGCCTGGCGGAGCGGCTCGTGATGCCCGGCTTCAT GCCTGAACCTGCGCGCTGGATCGGCCATTTCGACCTGCTCGCGCTGTCGTCGCTCAGCGAACAGGCGCCGATTGCAGTGA TCGAGGCGATGGCGGCGGCGCTGCCGGTGGTCAGCCCGGCGGTCGGCGACGTCACCGCGATGGTCTCCGATATGAACCGC CGTTTCATCACCGATGACGAGGCGGGCTTTCGCGCCGCGCTTGCCCGCATGGTGGGTGACAGCGCGTTGCGCAGGGCGGT CGGAGAGGAAAACCGGCGCGTCGCGACCGAATACTTCGACGAATCAACGATGGCCGCCGCCTATGAAAAGCTCTATGCTC GCGCACTCGAAGGCTATGGCCTGTTCAGCGGGCGCCGGATCGGCGTCGATTGA
Upstream 100 bases:
>100_bases CGCGCTTCGTCGAGGTGCCGGGCGTCGGCCACGCACCGACGCTGGACGAGCCCGAAGCCCGCACCGCGATCGACGCATGG ATGGCGGAGTTGCCGCGCGC
Downstream 100 bases:
>100_bases CAAAGGAGCCCGATATCCGCTTACGGAAAGGGCAAAGGGGGTCGGCGCGCGCTCGCGCACCGGCGGAGAGAGAGAAGGTT TAGCGTGTTCAAAGGTTTGA
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: Glycosyl Transferase Group 1 Family Protein; Polysaccharide Pyruvyl Transferase; Sugar Transferase; Glycosyltransferase-Like Protein; Glycosyl Transferase Group 1 Protein; Hexosyltransferase; Glycogen Synthase
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MNADPPERLRPVHILHLHSSFALGGKEARAVRLMNLMRARAAHTILSAVPGALGARDAIDSGIDVDFPADAPPLHGKPGL IRYGRLAHYMGRFDLVLTYNWGAMDGVMAHRLWAPFMRLPPLIHHEDGFNEDESIRRDWKRNLFRRLALPTVEALAVPSA LLERIAADEWGARERTVVIRNGIDTASYEAPPSVAIPGLERRPGDVVIGTIAGLRKVKDLPRLVRAVATLPPNVRLVIVG EGPERDAIRAAAATCGLAERLVMPGFMPEPARWIGHFDLLALSSLSEQAPIAVIEAMAAALPVVSPAVGDVTAMVSDMNR RFITDDEAGFRAALARMVGDSALRRAVGEENRRVATEYFDESTMAAAYEKLYARALEGYGLFSGRRIGVD
Sequences:
>Translated_390_residues MNADPPERLRPVHILHLHSSFALGGKEARAVRLMNLMRARAAHTILSAVPGALGARDAIDSGIDVDFPADAPPLHGKPGL IRYGRLAHYMGRFDLVLTYNWGAMDGVMAHRLWAPFMRLPPLIHHEDGFNEDESIRRDWKRNLFRRLALPTVEALAVPSA LLERIAADEWGARERTVVIRNGIDTASYEAPPSVAIPGLERRPGDVVIGTIAGLRKVKDLPRLVRAVATLPPNVRLVIVG EGPERDAIRAAAATCGLAERLVMPGFMPEPARWIGHFDLLALSSLSEQAPIAVIEAMAAALPVVSPAVGDVTAMVSDMNR RFITDDEAGFRAALARMVGDSALRRAVGEENRRVATEYFDESTMAAAYEKLYARALEGYGLFSGRRIGVD >Mature_390_residues MNADPPERLRPVHILHLHSSFALGGKEARAVRLMNLMRARAAHTILSAVPGALGARDAIDSGIDVDFPADAPPLHGKPGL IRYGRLAHYMGRFDLVLTYNWGAMDGVMAHRLWAPFMRLPPLIHHEDGFNEDESIRRDWKRNLFRRLALPTVEALAVPSA LLERIAADEWGARERTVVIRNGIDTASYEAPPSVAIPGLERRPGDVVIGTIAGLRKVKDLPRLVRAVATLPPNVRLVIVG EGPERDAIRAAAATCGLAERLVMPGFMPEPARWIGHFDLLALSSLSEQAPIAVIEAMAAALPVVSPAVGDVTAMVSDMNR RFITDDEAGFRAALARMVGDSALRRAVGEENRRVATEYFDESTMAAAYEKLYARALEGYGLFSGRRIGVD
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42561; Mature: 42561
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNADPPERLRPVHILHLHSSFALGGKEARAVRLMNLMRARAAHTILSAVPGALGARDAID CCCCCCHHCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC SGIDVDFPADAPPLHGKPGLIRYGRLAHYMGRFDLVLTYNWGAMDGVMAHRLWAPFMRLP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCC PLIHHEDGFNEDESIRRDWKRNLFRRLALPTVEALAVPSALLERIAADEWGARERTVVIR CCEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE NGIDTASYEAPPSVAIPGLERRPGDVVIGTIAGLRKVKDLPRLVRAVATLPPNVRLVIVG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC EGPERDAIRAAAATCGLAERLVMPGFMPEPARWIGHFDLLALSSLSEQAPIAVIEAMAAA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LPVVSPAVGDVTAMVSDMNRRFITDDEAGFRAALARMVGDSALRRAVGEENRRVATEYFD HHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ESTMAAAYEKLYARALEGYGLFSGRRIGVD HHHHHHHHHHHHHHHHHCCCCCCCCEECCC >Mature Secondary Structure MNADPPERLRPVHILHLHSSFALGGKEARAVRLMNLMRARAAHTILSAVPGALGARDAID CCCCCCHHCCCEEEEEECCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHC SGIDVDFPADAPPLHGKPGLIRYGRLAHYMGRFDLVLTYNWGAMDGVMAHRLWAPFMRLP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHCC PLIHHEDGFNEDESIRRDWKRNLFRRLALPTVEALAVPSALLERIAADEWGARERTVVIR CCEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE NGIDTASYEAPPSVAIPGLERRPGDVVIGTIAGLRKVKDLPRLVRAVATLPPNVRLVIVG CCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC EGPERDAIRAAAATCGLAERLVMPGFMPEPARWIGHFDLLALSSLSEQAPIAVIEAMAAA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LPVVSPAVGDVTAMVSDMNRRFITDDEAGFRAALARMVGDSALRRAVGEENRRVATEYFD HHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH ESTMAAAYEKLYARALEGYGLFSGRRIGVD HHHHHHHHHHHHHHHHHCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA