| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is cysH [H]
Identifier: 103486260
GI number: 103486260
Start: 775176
End: 775982
Strand: Reverse
Name: cysH [H]
Synonym: Sala_0768
Alternate gene names: 103486260
Gene position: 775982-775176 (Counterclockwise)
Preceding gene: 103486261
Following gene: 103486259
Centisome position: 23.2
GC content: 65.06
Gene sequence:
>807_bases ATGGGCATCTCGACTTCGCTCGATGCGAACGGAATTGGGAATGATCGTCGGCGCGACCGCATCGACGTCGCGCCGCGCTT CACCCAGGCGGACGTCATCCGCCTCAACAACCTTTTCCGCGGCCAGGACGCCGCCGAGGTCGTCGCGAGTGTGATCGGCG CCGGTTTGCTCGGCGAGACGGCGATCGTGTCGAGCTTCGGCGCCGAAAGCGCGGTGCTGCTCCATCTTGTCAGCCGCGTT GCGCCCGACATGCCGGTGCTTTTCCTCGATACCGGCAAGCATTTCCCCGAAACGCTCGCCTATCGCGACGAACTGGCGGC GCAGCTGGGGCTCAATATCGTCAATCTGACGCCCGATCCCGACGAACTGGCAAAAAAGGACGCCACCGAGCTTCGCTGGT CGTACGATCCCGACGGCTGCTGCGAAATCCGCAAGGTAAAGCCGCTCGAAAAGGCGCTGACCGATTTCGACACGTCGATC ACCGGCCGCAAGGGCTTTCAGTCGGCGACGCGGCAGGGCTTGCCGCGCTTCGAACTCGACGGAACCACCGGCCGCCTGAA GTTCAATCCACTCGCCAACTGGACGCGCGAGATGCTCGACGCCTATTTCGCCGAGCACGACCTGCCGCGCCATCCGCTGG AAGCGCAAGGCTATCCCTCGATCGGCTGTTCGCCCTGCACGTCGAAGGTGAAGCCGGGCGAAGACCCGCGCTCGGGCCGC TGGCGCGGCTGGGACAAGACCGAATGCGGCATCCACGAAGCGGTGACGCCGCTGGGCGACGATCCGGCGAACGACCCGGC GTTTTGA
Upstream 100 bases:
>100_bases GGCGCGGTGCCGATATGGAAATTAAGGCATGGCTAAACCTGATCCTAAAATCCCGTTCGTGTCGAGCGAAGTCGAGACAC CGAGAGGGCATGCACCCACG
Downstream 100 bases:
>100_bases GTAAACGTCATCCCAGCGAAAGCTGGGATCGCTGGCCATCTTGCGCTACGCTGTCAGCATGGGCCGGGGCGGATATGTCT ATATTATGACCAACAAACGT
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MGISTSLDANGIGNDRRRDRIDVAPRFTQADVIRLNNLFRGQDAAEVVASVIGAGLLGETAIVSSFGAESAVLLHLVSRV APDMPVLFLDTGKHFPETLAYRDELAAQLGLNIVNLTPDPDELAKKDATELRWSYDPDGCCEIRKVKPLEKALTDFDTSI TGRKGFQSATRQGLPRFELDGTTGRLKFNPLANWTREMLDAYFAEHDLPRHPLEAQGYPSIGCSPCTSKVKPGEDPRSGR WRGWDKTECGIHEAVTPLGDDPANDPAF
Sequences:
>Translated_268_residues MGISTSLDANGIGNDRRRDRIDVAPRFTQADVIRLNNLFRGQDAAEVVASVIGAGLLGETAIVSSFGAESAVLLHLVSRV APDMPVLFLDTGKHFPETLAYRDELAAQLGLNIVNLTPDPDELAKKDATELRWSYDPDGCCEIRKVKPLEKALTDFDTSI TGRKGFQSATRQGLPRFELDGTTGRLKFNPLANWTREMLDAYFAEHDLPRHPLEAQGYPSIGCSPCTSKVKPGEDPRSGR WRGWDKTECGIHEAVTPLGDDPANDPAF >Mature_267_residues GISTSLDANGIGNDRRRDRIDVAPRFTQADVIRLNNLFRGQDAAEVVASVIGAGLLGETAIVSSFGAESAVLLHLVSRVA PDMPVLFLDTGKHFPETLAYRDELAAQLGLNIVNLTPDPDELAKKDATELRWSYDPDGCCEIRKVKPLEKALTDFDTSIT GRKGFQSATRQGLPRFELDGTTGRLKFNPLANWTREMLDAYFAEHDLPRHPLEAQGYPSIGCSPCTSKVKPGEDPRSGRW RGWDKTECGIHEAVTPLGDDPANDPAF
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=254, Percent_Identity=33.4645669291339, Blast_Score=115, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6325425, Length=231, Percent_Identity=35.0649350649351, Blast_Score=120, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 29347; Mature: 29216
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGISTSLDANGIGNDRRRDRIDVAPRFTQADVIRLNNLFRGQDAAEVVASVIGAGLLGET CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH AIVSSFGAESAVLLHLVSRVAPDMPVLFLDTGKHFPETLAYRDELAAQLGLNIVNLTPDP HHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCH DELAKKDATELRWSYDPDGCCEIRKVKPLEKALTDFDTSITGRKGFQSATRQGLPRFELD HHHHHCCHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEC GTTGRLKFNPLANWTREMLDAYFAEHDLPRHPLEAQGYPSIGCSPCTSKVKPGEDPRSGR CCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WRGWDKTECGIHEAVTPLGDDPANDPAF CCCCCCCCCCHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GISTSLDANGIGNDRRRDRIDVAPRFTQADVIRLNNLFRGQDAAEVVASVIGAGLLGET CCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH AIVSSFGAESAVLLHLVSRVAPDMPVLFLDTGKHFPETLAYRDELAAQLGLNIVNLTPDP HHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEECCCCH DELAKKDATELRWSYDPDGCCEIRKVKPLEKALTDFDTSITGRKGFQSATRQGLPRFELD HHHHHCCHHHCCCCCCCCCCHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEC GTTGRLKFNPLANWTREMLDAYFAEHDLPRHPLEAQGYPSIGCSPCTSKVKPGEDPRSGR CCCCEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WRGWDKTECGIHEAVTPLGDDPANDPAF CCCCCCCCCCHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]