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The map label for this gene is 103486259

Identifier: 103486259

GI number: 103486259

Start: 774827

End: 775135

Strand: Reverse

Name: 103486259

Synonym: Sala_0767

Alternate gene names: NA

Gene position: 775135-774827 (Counterclockwise)

Preceding gene: 103486260

Following gene: 103486257

Centisome position: 23.17

GC content: 52.1

Gene sequence:

>309_bases
TTGCGCTACGCTGTCAGCATGGGCCGGGGCGGATATGTCTATATTATGACCAACAAACGTGGCGGCGTACTCTACATTGG
AGTCACCGCCGACATTGCGGCACGCATTTTTCAGCACAAAACGGGACGAGGATCAGCTTTCTGCCGAAAATGCGGGCTAA
CGATGCTCGTACTCGCCGAGGAATATCCAACGATCGAAGAGGCGATCGCGCGTGAAAAAGCAATGAAAGCCTGGAAGCGG
CAGTGGAAGATCGAACTGATCGAAGCAAGCAATCCCAATTGGGATGATCTGGCACCCAATATTCTTTGA

Upstream 100 bases:

>100_bases
GGCATCCACGAAGCGGTGACGCCGCTGGGCGACGATCCGGCGAACGACCCGGCGTTTTGAGTAAACGTCATCCCAGCGAA
AGCTGGGATCGCTGGCCATC

Downstream 100 bases:

>100_bases
AGTCGCCCCGGCGAACGCCGGGCCCGCCATCATTCATTTTATCCCGCGAGCGATCCCAGCTTTCGCTGGGATGACGATTT
AACGCAGACGTCACTCACTC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MRYAVSMGRGGYVYIMTNKRGGVLYIGVTADIAARIFQHKTGRGSAFCRKCGLTMLVLAEEYPTIEEAIAREKAMKAWKR
QWKIELIEASNPNWDDLAPNIL

Sequences:

>Translated_102_residues
MRYAVSMGRGGYVYIMTNKRGGVLYIGVTADIAARIFQHKTGRGSAFCRKCGLTMLVLAEEYPTIEEAIAREKAMKAWKR
QWKIELIEASNPNWDDLAPNIL
>Mature_102_residues
MRYAVSMGRGGYVYIMTNKRGGVLYIGVTADIAARIFQHKTGRGSAFCRKCGLTMLVLAEEYPTIEEAIAREKAMKAWKR
QWKIELIEASNPNWDDLAPNIL

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11526; Mature: 11526

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS50164 UVRC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYAVSMGRGGYVYIMTNKRGGVLYIGVTADIAARIFQHKTGRGSAFCRKCGLTMLVLAE
CCEEEECCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEC
EYPTIEEAIAREKAMKAWKRQWKIELIEASNPNWDDLAPNIL
CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRYAVSMGRGGYVYIMTNKRGGVLYIGVTADIAARIFQHKTGRGSAFCRKCGLTMLVLAE
CCEEEECCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEEC
EYPTIEEAIAREKAMKAWKRQWKIELIEASNPNWDDLAPNIL
CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA