| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486261
Identifier: 103486261
GI number: 103486261
Start: 776047
End: 776493
Strand: Reverse
Name: 103486261
Synonym: Sala_0769
Alternate gene names: NA
Gene position: 776493-776047 (Counterclockwise)
Preceding gene: 103486262
Following gene: 103486260
Centisome position: 23.21
GC content: 63.76
Gene sequence:
>447_bases ATGGTTGAACGCTCCGATAATCAGTCCCTTCCGCAAGCGGAAGGGTGGCACAGCGACGGCGAGGAACCCTGCGTCACGCT CGACGCCTTCCTCGCGCAGTCGAATGCCACCGCAGTGCGGCTTGAGAGCGACGAGGATGCCCGCGCGCTGATCCCCTATC TCGACCGATTGAAGCTGATCGAGATCGCCTTTCCCGCCTTTCGTGACGGCCGCGGCTATTCGTCGGCGCGCATCCTGCGC GAGGCGGGCTATGTCGGCGAACTGCGCGCACAGGGCGACGTGCTCGTCGACCAGATCGCCTTTATGAAGCGCTGCGGCTT CGACAGTTTCGCGCCCGAAAAACCGCTCAATCCCGCCGATGTCGAGGCGGCGCTGACGCGCTGGCCCCAACATTATCAGA CCGCCGCCGACGGCGCGGTGCCGATATGGAAATTAAGGCATGGCTAA
Upstream 100 bases:
>100_bases GAGCGCGTCACCGACAAATATCTCGCGACAAGGACCGAGGGCGAACGTTTCGTCGACACCTTCCGCCGCGTCGGCATGGC CCCGTTCAAGGAGGCGATCT
Downstream 100 bases:
>100_bases ACCTGATCCTAAAATCCCGTTCGTGTCGAGCGAAGTCGAGACACCGAGAGGGCATGCACCCACGATGGGCATCTCGACTT CGCTCGATGCGAACGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLIEIAFPAFRDGRGYSSARILR EAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPADVEAALTRWPQHYQTAADGAVPIWKLRHG
Sequences:
>Translated_148_residues MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLIEIAFPAFRDGRGYSSARILR EAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPADVEAALTRWPQHYQTAADGAVPIWKLRHG >Mature_148_residues MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLIEIAFPAFRDGRGYSSARILR EAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPADVEAALTRWPQHYQTAADGAVPIWKLRHG
Specific function: Unknown
COG id: COG3749
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16444; Mature: 16444
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLI CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH EIAFPAFRDGRGYSSARILREAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPAD HHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH VEAALTRWPQHYQTAADGAVPIWKLRHG HHHHHHHCCHHHHHHCCCCCCEEEECCC >Mature Secondary Structure MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLI CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH EIAFPAFRDGRGYSSARILREAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPAD HHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH VEAALTRWPQHYQTAADGAVPIWKLRHG HHHHHHHCCHHHHHHCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA