Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486261

Identifier: 103486261

GI number: 103486261

Start: 776047

End: 776493

Strand: Reverse

Name: 103486261

Synonym: Sala_0769

Alternate gene names: NA

Gene position: 776493-776047 (Counterclockwise)

Preceding gene: 103486262

Following gene: 103486260

Centisome position: 23.21

GC content: 63.76

Gene sequence:

>447_bases
ATGGTTGAACGCTCCGATAATCAGTCCCTTCCGCAAGCGGAAGGGTGGCACAGCGACGGCGAGGAACCCTGCGTCACGCT
CGACGCCTTCCTCGCGCAGTCGAATGCCACCGCAGTGCGGCTTGAGAGCGACGAGGATGCCCGCGCGCTGATCCCCTATC
TCGACCGATTGAAGCTGATCGAGATCGCCTTTCCCGCCTTTCGTGACGGCCGCGGCTATTCGTCGGCGCGCATCCTGCGC
GAGGCGGGCTATGTCGGCGAACTGCGCGCACAGGGCGACGTGCTCGTCGACCAGATCGCCTTTATGAAGCGCTGCGGCTT
CGACAGTTTCGCGCCCGAAAAACCGCTCAATCCCGCCGATGTCGAGGCGGCGCTGACGCGCTGGCCCCAACATTATCAGA
CCGCCGCCGACGGCGCGGTGCCGATATGGAAATTAAGGCATGGCTAA

Upstream 100 bases:

>100_bases
GAGCGCGTCACCGACAAATATCTCGCGACAAGGACCGAGGGCGAACGTTTCGTCGACACCTTCCGCCGCGTCGGCATGGC
CCCGTTCAAGGAGGCGATCT

Downstream 100 bases:

>100_bases
ACCTGATCCTAAAATCCCGTTCGTGTCGAGCGAAGTCGAGACACCGAGAGGGCATGCACCCACGATGGGCATCTCGACTT
CGCTCGATGCGAACGGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLIEIAFPAFRDGRGYSSARILR
EAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPADVEAALTRWPQHYQTAADGAVPIWKLRHG

Sequences:

>Translated_148_residues
MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLIEIAFPAFRDGRGYSSARILR
EAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPADVEAALTRWPQHYQTAADGAVPIWKLRHG
>Mature_148_residues
MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLIEIAFPAFRDGRGYSSARILR
EAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPADVEAALTRWPQHYQTAADGAVPIWKLRHG

Specific function: Unknown

COG id: COG3749

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16444; Mature: 16444

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLI
CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
EIAFPAFRDGRGYSSARILREAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPAD
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VEAALTRWPQHYQTAADGAVPIWKLRHG
HHHHHHHCCHHHHHHCCCCCCEEEECCC
>Mature Secondary Structure
MVERSDNQSLPQAEGWHSDGEEPCVTLDAFLAQSNATAVRLESDEDARALIPYLDRLKLI
CCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
EIAFPAFRDGRGYSSARILREAGYVGELRAQGDVLVDQIAFMKRCGFDSFAPEKPLNPAD
HHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
VEAALTRWPQHYQTAADGAVPIWKLRHG
HHHHHHHCCHHHHHHCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA