Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is yegX [C]

Identifier: 103486256

GI number: 103486256

Start: 771715

End: 772470

Strand: Reverse

Name: yegX [C]

Synonym: Sala_0764

Alternate gene names: 103486256

Gene position: 772470-771715 (Counterclockwise)

Preceding gene: 103486257

Following gene: 103486255

Centisome position: 23.09

GC content: 70.37

Gene sequence:

>756_bases
ATGAAGCTGCGGGCCATCGGGGGCGAGCAGAAAGCGGGGCGCAGCAACGGCTGGCGCGGCGCGGCTGCGCGCTTCCTCCG
CCGTATCGGCGCCGCGGCGGTGCTCCTCCTCCTCGCGACGGGCCTCGCACTCTGGTGGGCGGCGCGCTGGACGCCCGATC
GCGCCATCTATCCCGTGCAGGGCGTCACGATCGACGCCGACAACGGCGAGGTCCATTGGGGATCGATCAAGGCCGCGGGC
GCCGATTTCGCCTATATCGCCGCGACCGATGGCACCGCAGGCGTCGACGCGCGGTTCGCGCGCAACCTGTCGCGCGCGCG
CGATGCGGGGGTGCAGGCAGGCCCGATACACCGCTACAGCCTCTGCCACCTCGCGACCGACCAGGCCGCCAATTTCATCC
GCCACGTCCCGCGCCGCGCCGACATGCTGCCGGCCGTGGTCTGGCTCGATTATGACGACCGCTGCCCCGACCGGCCGACG
CGCGCGCTGCTCTTGTCCGAACTCGCGACCTTCCTCGCGCAGATCGAGACGCATATGGGCAAGCAGAGCCTGATCGCGCC
GGGGCCGGCGTTCGAGGCCGATTACCGCGTGACACGCGGCATCGCGCGCACGACCTGGCTGCGGCGCGATTTCTTCGAGC
CCGATTATGGCGCGCATCCCTGGACGATGTGGCAGGCGAATGATTATGTCCGCCTGTCGGGCGCCGACGGCACCGTCGGC
TGGAACGTGCTGCGCGCAGGTGGAGAGATGCGATGA

Upstream 100 bases:

>100_bases
AGATGTTGATGGACCGGCTCGACGGCAAGATCGCGGTCGATTTCGATACCGCGCGACGGTTGTTCACGCTGATCTGTGTG
CTCCACATCAAGGGCTGACG

Downstream 100 bases:

>100_bases
CCGACACGACGACCCGCAACGCGCTGATCGCCGCCGCGCGCGATGCCGCGAGCCGCGCCTACGCGCCCTATTCGGGCTTT
CATGTCGGCGCCGCGCTGCT

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Glycoside Hydrolase Family Protein; Lysozyme; Glycosyl Hydrolase Family; Glycosyl Hydrolase/Lysozyme; Glycosy Hydrolase Family Protein; Glycosyl Transferase; Cell-Wall Lytic; Glycosyl Hydrolases Family; Glycosyl Hydrolase Lysozyme Protein; Family; Extracellular Glycosyl Hydrolase; Glycoside Hydrolase Protein; Glycosyl Hydrolase; Cell-Wall Lytic Muramidase Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MKLRAIGGEQKAGRSNGWRGAAARFLRRIGAAAVLLLLATGLALWWAARWTPDRAIYPVQGVTIDADNGEVHWGSIKAAG
ADFAYIAATDGTAGVDARFARNLSRARDAGVQAGPIHRYSLCHLATDQAANFIRHVPRRADMLPAVVWLDYDDRCPDRPT
RALLLSELATFLAQIETHMGKQSLIAPGPAFEADYRVTRGIARTTWLRRDFFEPDYGAHPWTMWQANDYVRLSGADGTVG
WNVLRAGGEMR

Sequences:

>Translated_251_residues
MKLRAIGGEQKAGRSNGWRGAAARFLRRIGAAAVLLLLATGLALWWAARWTPDRAIYPVQGVTIDADNGEVHWGSIKAAG
ADFAYIAATDGTAGVDARFARNLSRARDAGVQAGPIHRYSLCHLATDQAANFIRHVPRRADMLPAVVWLDYDDRCPDRPT
RALLLSELATFLAQIETHMGKQSLIAPGPAFEADYRVTRGIARTTWLRRDFFEPDYGAHPWTMWQANDYVRLSGADGTVG
WNVLRAGGEMR
>Mature_251_residues
MKLRAIGGEQKAGRSNGWRGAAARFLRRIGAAAVLLLLATGLALWWAARWTPDRAIYPVQGVTIDADNGEVHWGSIKAAG
ADFAYIAATDGTAGVDARFARNLSRARDAGVQAGPIHRYSLCHLATDQAANFIRHVPRRADMLPAVVWLDYDDRCPDRPT
RALLLSELATFLAQIETHMGKQSLIAPGPAFEADYRVTRGIARTTWLRRDFFEPDYGAHPWTMWQANDYVRLSGADGTVG
WNVLRAGGEMR

Specific function: Unknown

COG id: COG3757

COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082043, Length=202, Percent_Identity=25.7425742574257, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27643; Mature: 27643

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRAIGGEQKAGRSNGWRGAAARFLRRIGAAAVLLLLATGLALWWAARWTPDRAIYPVQ
CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
GVTIDADNGEVHWGSIKAAGADFAYIAATDGTAGVDARFARNLSRARDAGVQAGPIHRYS
CEEEECCCCEEEECEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
LCHLATDQAANFIRHVPRRADMLPAVVWLDYDDRCPDRPTRALLLSELATFLAQIETHMG
HHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
KQSLIAPGPAFEADYRVTRGIARTTWLRRDFFEPDYGAHPWTMWQANDYVRLSGADGTVG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCC
WNVLRAGGEMR
HHHEECCCCCC
>Mature Secondary Structure
MKLRAIGGEQKAGRSNGWRGAAARFLRRIGAAAVLLLLATGLALWWAARWTPDRAIYPVQ
CEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC
GVTIDADNGEVHWGSIKAAGADFAYIAATDGTAGVDARFARNLSRARDAGVQAGPIHRYS
CEEEECCCCEEEECEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
LCHLATDQAANFIRHVPRRADMLPAVVWLDYDDRCPDRPTRALLLSELATFLAQIETHMG
HHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
KQSLIAPGPAFEADYRVTRGIARTTWLRRDFFEPDYGAHPWTMWQANDYVRLSGADGTVG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCCCC
WNVLRAGGEMR
HHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA