| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486252
Identifier: 103486252
GI number: 103486252
Start: 768488
End: 769288
Strand: Reverse
Name: 103486252
Synonym: Sala_0760
Alternate gene names: NA
Gene position: 769288-768488 (Counterclockwise)
Preceding gene: 103486253
Following gene: 103486248
Centisome position: 23.0
GC content: 68.66
Gene sequence:
>801_bases ATGACGACCTCTCCCGGCGCGCTCGACGCGCTGCTCGCGACGCTGCGCACCGAAGAGGGCGTGGCCAAGGCGCATATCGA CGAAGGCTGGATGCAGGGCCGTACCGCCTATGGCGGGATCAGCTCGGCGGTCGCGCTCGCGGGCGCGATGGCGCTCCACC CGACCGAGGCACCGCTGCGCTATGCGCAGATCAGCTTCGTCGGTCCCGTCGGCGGCGATTGTACGGTCGAGACGCGCGTG CTGCGTCAGTCGAAATCGTCGCTGTTCATCGACGCCGGTGTGTCGAGCGACATGGGGTTCGGCACCGCGGCAGTCTTCGC CTTCTCCCCCGACCGGCCGAGCCATGTCGACCATGACCGGCTGACGATGCCGGACGCCCCCGCCCCCGAAACGCTGGCGC CGGTGCCCGAACATCATGCGCGCCCTGCCTTCACCCGCCATTTCGACATGCGCCCGACGACGGGGCCGCGCTTTGGGTGG AAAAGCGATGTGGGCGAATATCTGACCTGGGTGCGCTTCGCCCAGGAACCGCAATGCCACCCCACGGTCGCGCTGCTCGC CATGGGCGACGCACTGCCCCCCGCGGCGATGGCGCTGTTCAGCCAGTTCGGGCCGATCAGCTCGATGAACTGGACGGTCA ACATGCTGACTGCCGCGCCCGCTACCGATGACGGCTGGTGGCTGCTCTCGGCGAAGACCGGCTATGCGCGCCACGGCCTG TCGGTGCAGGACATGATGCTGTGGAACCGCGCGGGCCAGCCGATCCTCAGCGGCAGCCAGGCGATCGCGATCTACGTCTG A
Upstream 100 bases:
>100_bases GGCGGCGTATGGACGCCGGGCGCGCTGCTTGGCCAGGCGCTGATCGACCGGCTGACTGCCAACGCCGGACTGACCTTTCA GATCGAGGAATGACAACAGA
Downstream 100 bases:
>100_bases TTGGGGACGATTGGGGACGTCCGGCTTTGCGACGCCATTTGCATCGAGTGGGAAGGTTCAAAGGCGGTCAAAGTGGTTCT CTTCCCTTCAGGGGCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: TesB-Like Acyl-CoA Thioesterase; TesB Family Acyl-CoA Thioesterase; Acyl-CoA Thioesterase; Thioesterase Superfamily Protein; Acyl-CoA Thioesterase TesB Family Protein; Acyl-CoA Thioesterase-Like Protein; Thioesterase-Like Protein
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MTTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLRYAQISFVGPVGGDCTVETRV LRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDRLTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGW KSDVGEYLTWVRFAQEPQCHPTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL SVQDMMLWNRAGQPILSGSQAIAIYV
Sequences:
>Translated_266_residues MTTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLRYAQISFVGPVGGDCTVETRV LRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDRLTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGW KSDVGEYLTWVRFAQEPQCHPTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL SVQDMMLWNRAGQPILSGSQAIAIYV >Mature_265_residues TTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLRYAQISFVGPVGGDCTVETRVL RQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDRLTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGWK SDVGEYLTWVRFAQEPQCHPTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGLS VQDMMLWNRAGQPILSGSQAIAIYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28494; Mature: 28362
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLR CCCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCE YAQISFVGPVGGDCTVETRVLRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDR EEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC LTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGWKSDVGEYLTWVRFAQEPQCH CCCCCCCCCCCCCCCCCHHCCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC PTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHCCC SVQDMMLWNRAGQPILSGSQAIAIYV CHHHHHHHHHCCCCEECCCCEEEEEC >Mature Secondary Structure TTSPGALDALLATLRTEEGVAKAHIDEGWMQGRTAYGGISSAVALAGAMALHPTEAPLR CCCCHHHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCE YAQISFVGPVGGDCTVETRVLRQSKSSLFIDAGVSSDMGFGTAAVFAFSPDRPSHVDHDR EEEEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCC LTMPDAPAPETLAPVPEHHARPAFTRHFDMRPTTGPRFGWKSDVGEYLTWVRFAQEPQCH CCCCCCCCCCCCCCCCCHHCCCCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC PTVALLAMGDALPPAAMALFSQFGPISSMNWTVNMLTAAPATDDGWWLLSAKTGYARHGL CEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCEEEEEECCCCHHCCC SVQDMMLWNRAGQPILSGSQAIAIYV CHHHHHHHHHCCCCEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA