| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is envZ [H]
Identifier: 103486251
GI number: 103486251
Start: 767085
End: 768377
Strand: Direct
Name: envZ [H]
Synonym: Sala_0759
Alternate gene names: 103486251
Gene position: 767085-768377 (Clockwise)
Preceding gene: 103486250
Following gene: 103486258
Centisome position: 22.93
GC content: 71.08
Gene sequence:
>1293_bases GTGATGCTGTTCGTCGCGCAGGCGGTCAATTTTGCGCTGCTCGTGCGCGGACAAAAGCAACAGATGCTCGCGCATGGCGG CGGCATGGCGGTGGCGCGGATCATCGATGCGATCGACCGCCACGAAAGCGGCCGGATCGCGGCGATGCCCGATCGCCGCC AGCGTTCTGGCCGGGCGCGCATCCCGAAACTCTGGGTCGGCGCCAGCGCGCCGCCGGTGCCCGAGCGCGCGGTCGCGCTG CCGGCGATGGCGGACTATGTGCACGACCTGCTCGCCGAGGCCGAGGTCGATGCCGCAGCCGTCACCGCGTGGGCCTTGCC GCAGCGGCCGCGGCTGGGGCGCACACGGCTGCCCGGTCGCACCGTGCTCGTCGTCGCCGAGGTGGATGGGCGCTTCTATG GCGTACGCACCCGCGTCGCGCCCGACGGTCGCCGCTTGCAGGGCTTCCTCGTCTGGCAGACGCTGTCGCTCTACCTCTTG CTGCTGATCCCGATCCTCGTGATCGCGTGGCGCGTCGCCGCGCCGCTCCGCGACCTGACGCGCGCGGCGCGCGCCAGCCC TGCGCTGCACGAGGCGGTGCCGCTCGCGGAGGCGGGACCGTCGGACGTGCGCGACCTGATTGCGGCTTTCAACGCCTATC GCGCGCGCATCGCGGCGATGCTGGCCGACAAGGACCGGATGCTCGGCGCGGTCGGGCATGACTTGCGCACCCCGCTTGCC AGCCTGCGCGTCCGCGTCGAGCAGGTCGAGGATGATCGGCTGCGCGACAAGATGATCGCCAGCATCGACGAAATGACCGC GATGCTGACCGATATATTGGCGCTGGCGCGGTCGGGCGCGGGGACCGAGGCGGTCGGGGCGCTCGCACTGGACGAACTCG TCGGCGAAATCATTGCCGACTATCGCGAGCGCGGCAAGGATGTCGCGGCGGGGGCGTTGGCCCCGGCGACGGTGCACGCG CGGCCGATGCTGCTGAAGCGCGCGGTGCGCAACCTCGTCGACAATGCCGTCGCCTATGGCGTGCGCGCGCGGCTGTCGGT GATGGTAGAGGGCGGCAAGGCGCGGATTATCGTGTCGGACGACGGCCCCGGCCTGACCGACGAGCAGATCCGTACGCTGG TCGAACCCTTCGCGCGTGGCGAGTTGTCGCGCAACCGTGCGACTGGCGGTGCTGGCCTGGGCCTGTCGATCGCCCGCGAA ATTGCGGAGGGCGAGGGAGGAACGCTGACACTTGCGAACCGCGCGGGCGGCGGGCTCGATGCGGTGATCGCGTTGCCGGT TCAGGGGCGGTGA
Upstream 100 bases:
>100_bases GTTATACGCTCGCGTGCGAGGTCAAGCGACTGGGCCCCGCTGCGTGAGGCTGCGACTTTGGCCCCGCAGCCTGATCGGGC AGCTGGTCTTCGCGGTCGCG
Downstream 100 bases:
>100_bases GCCGCCATAGCCCGCGCCCCTGAAGGGAAGAGAACCACTTTGACCGCCTTTGAACCTTCCCACTCGATGCAAATGGCGTC GCAAAGCCGGACGTCCCCAA
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MMLFVAQAVNFALLVRGQKQQMLAHGGGMAVARIIDAIDRHESGRIAAMPDRRQRSGRARIPKLWVGASAPPVPERAVAL PAMADYVHDLLAEAEVDAAAVTAWALPQRPRLGRTRLPGRTVLVVAEVDGRFYGVRTRVAPDGRRLQGFLVWQTLSLYLL LLIPILVIAWRVAAPLRDLTRAARASPALHEAVPLAEAGPSDVRDLIAAFNAYRARIAAMLADKDRMLGAVGHDLRTPLA SLRVRVEQVEDDRLRDKMIASIDEMTAMLTDILALARSGAGTEAVGALALDELVGEIIADYRERGKDVAAGALAPATVHA RPMLLKRAVRNLVDNAVAYGVRARLSVMVEGGKARIIVSDDGPGLTDEQIRTLVEPFARGELSRNRATGGAGLGLSIARE IAEGEGGTLTLANRAGGGLDAVIALPVQGR
Sequences:
>Translated_430_residues MMLFVAQAVNFALLVRGQKQQMLAHGGGMAVARIIDAIDRHESGRIAAMPDRRQRSGRARIPKLWVGASAPPVPERAVAL PAMADYVHDLLAEAEVDAAAVTAWALPQRPRLGRTRLPGRTVLVVAEVDGRFYGVRTRVAPDGRRLQGFLVWQTLSLYLL LLIPILVIAWRVAAPLRDLTRAARASPALHEAVPLAEAGPSDVRDLIAAFNAYRARIAAMLADKDRMLGAVGHDLRTPLA SLRVRVEQVEDDRLRDKMIASIDEMTAMLTDILALARSGAGTEAVGALALDELVGEIIADYRERGKDVAAGALAPATVHA RPMLLKRAVRNLVDNAVAYGVRARLSVMVEGGKARIIVSDDGPGLTDEQIRTLVEPFARGELSRNRATGGAGLGLSIARE IAEGEGGTLTLANRAGGGLDAVIALPVQGR >Mature_430_residues MMLFVAQAVNFALLVRGQKQQMLAHGGGMAVARIIDAIDRHESGRIAAMPDRRQRSGRARIPKLWVGASAPPVPERAVAL PAMADYVHDLLAEAEVDAAAVTAWALPQRPRLGRTRLPGRTVLVVAEVDGRFYGVRTRVAPDGRRLQGFLVWQTLSLYLL LLIPILVIAWRVAAPLRDLTRAARASPALHEAVPLAEAGPSDVRDLIAAFNAYRARIAAMLADKDRMLGAVGHDLRTPLA SLRVRVEQVEDDRLRDKMIASIDEMTAMLTDILALARSGAGTEAVGALALDELVGEIIADYRERGKDVAAGALAPATVHA RPMLLKRAVRNLVDNAVAYGVRARLSVMVEGGKARIIVSDDGPGLTDEQIRTLVEPFARGELSRNRATGGAGLGLSIARE IAEGEGGTLTLANRAGGGLDAVIALPVQGR
Specific function: Member of the two-component regulatory system envZ/ompR involved in the regulation of osmoregulation (genes ompF and ompC). EnvZ functions as a membrane-associated protein kinase that phosphorylates ompR in response to environmental signals [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1789808, Length=258, Percent_Identity=34.1085271317829, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1787894, Length=251, Percent_Identity=31.0756972111554, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1790346, Length=249, Percent_Identity=27.710843373494, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI87082128, Length=317, Percent_Identity=26.1829652996845, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI1789403, Length=281, Percent_Identity=31.6725978647687, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788393, Length=232, Percent_Identity=29.3103448275862, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=32.8828828828829, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1790551, Length=262, Percent_Identity=30.5343511450382, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786783, Length=327, Percent_Identity=22.9357798165138, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1790861, Length=301, Percent_Identity=26.9102990033223, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1789149, Length=218, Percent_Identity=24.3119266055046, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1786600, Length=218, Percent_Identity=27.0642201834862, Blast_Score=66, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 45947; Mature: 45947
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLFVAQAVNFALLVRGQKQQMLAHGGGMAVARIIDAIDRHESGRIAAMPDRRQRSGRAR CEEEEEHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCC IPKLWVGASAPPVPERAVALPAMADYVHDLLAEAEVDAAAVTAWALPQRPRLGRTRLPGR CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC TVLVVAEVDGRFYGVRTRVAPDGRRLQGFLVWQTLSLYLLLLIPILVIAWRVAAPLRDLT EEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAARASPALHEAVPLAEAGPSDVRDLIAAFNAYRARIAAMLADKDRMLGAVGHDLRTPLA HHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLRVRVEQVEDDRLRDKMIASIDEMTAMLTDILALARSGAGTEAVGALALDELVGEIIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH YRERGKDVAAGALAPATVHARPMLLKRAVRNLVDNAVAYGVRARLSVMVEGGKARIIVSD HHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEEEC DGPGLTDEQIRTLVEPFARGELSRNRATGGAGLGLSIAREIAEGEGGTLTLANRAGGGLD CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCE AVIALPVQGR EEEEECCCCC >Mature Secondary Structure MMLFVAQAVNFALLVRGQKQQMLAHGGGMAVARIIDAIDRHESGRIAAMPDRRQRSGRAR CEEEEEHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHCCCCC IPKLWVGASAPPVPERAVALPAMADYVHDLLAEAEVDAAAVTAWALPQRPRLGRTRLPGR CCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCC TVLVVAEVDGRFYGVRTRVAPDGRRLQGFLVWQTLSLYLLLLIPILVIAWRVAAPLRDLT EEEEEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAARASPALHEAVPLAEAGPSDVRDLIAAFNAYRARIAAMLADKDRMLGAVGHDLRTPLA HHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH SLRVRVEQVEDDRLRDKMIASIDEMTAMLTDILALARSGAGTEAVGALALDELVGEIIAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH YRERGKDVAAGALAPATVHARPMLLKRAVRNLVDNAVAYGVRARLSVMVEGGKARIIVSD HHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCEEEEEEEC DGPGLTDEQIRTLVEPFARGELSRNRATGGAGLGLSIAREIAEGEGGTLTLANRAGGGLD CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCE AVIALPVQGR EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 6292200; 2997120; 9278503; 8132603; 2277041; 2824492; 1323560; 9817206; 10426948 [H]