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The map label for this gene is ompR [H]

Identifier: 103486250

GI number: 103486250

Start: 766297

End: 767031

Strand: Direct

Name: ompR [H]

Synonym: Sala_0758

Alternate gene names: 103486250

Gene position: 766297-767031 (Clockwise)

Preceding gene: 103486249

Following gene: 103486251

Centisome position: 22.91

GC content: 66.39

Gene sequence:

>735_bases
ATGACCGATAGCGACATGCCGCGCATCCTGCTGATCGACGACGAACCGTCGATCCGCGAGCCGCTGGGCGAATATCTGAC
CGCGCAGGGCTTTGCCGTGACCGATGCCGCGAGCGCCGCCGAGGCGCGATCGGTGCTGCGCGCCAAATCGGTCGACCTTG
TGGTCAGCGACATCATGATGCCCGGCGAGGACGGACTCTCGCTCACCCGCCACCTGCGCGAGACGAGCAGCATCCCGGTC
ATCCTGCTGACCGCGCGCGCCGAGGATACCGAACGGATCATCGGACTGGAGATCGGCGCCGACGATTATGTCGTCAAACC
CTTCAACCCTCGCGAACTGGTCGCGCGCATCCGCACGGTGCTGCGCCGGACGCAGCAGAACGGGCGCTCGCTCGACGCGG
GCGGCACCTGCTATGCCTTTGGCGACTGGGTGCTTCGCGAAGTCGAGCGCGTTCTGGTCGATGGAAAGGGGAGCGAAGTC
GCGCTGTCGTCGGGCGAATATCACCTGCTCCACGCGCTGGTGCGCCACCCGCGGCAGGTGATGAGCCGTGACCGGCTGCT
CGATCTGGTGCGCGGGCGCGAGGCCGATATTTTCGATCGCGCGATCGACAATCTGGTCAGTCGGCTGCGCAAGAAGATCG
AGGCCGATCCCGCGCATCCGCAGATCGTCAAGACCGTCTGGGGCGGGGGTTATACGCTCGCGTGCGAGGTCAAGCGACTG
GGCCCCGCTGCGTGA

Upstream 100 bases:

>100_bases
CCCCCCCTCCCGGCATTGCCTTTGCCGCCGGTCCCTGCCAGCTATCGCCCACCGGTCGTTCGCGGTCGGTGGGCGAACCA
GCTTGAGTGACGGAACCCCG

Downstream 100 bases:

>100_bases
GGCTGCGACTTTGGCCCCGCAGCCTGATCGGGCAGCTGGTCTTCGCGGTCGCGGTGATGCTGTTCGTCGCGCAGGCGGTC
AATTTTGCGCTGCTCGTGCG

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MTDSDMPRILLIDDEPSIREPLGEYLTAQGFAVTDAASAAEARSVLRAKSVDLVVSDIMMPGEDGLSLTRHLRETSSIPV
ILLTARAEDTERIIGLEIGADDYVVKPFNPRELVARIRTVLRRTQQNGRSLDAGGTCYAFGDWVLREVERVLVDGKGSEV
ALSSGEYHLLHALVRHPRQVMSRDRLLDLVRGREADIFDRAIDNLVSRLRKKIEADPAHPQIVKTVWGGGYTLACEVKRL
GPAA

Sequences:

>Translated_244_residues
MTDSDMPRILLIDDEPSIREPLGEYLTAQGFAVTDAASAAEARSVLRAKSVDLVVSDIMMPGEDGLSLTRHLRETSSIPV
ILLTARAEDTERIIGLEIGADDYVVKPFNPRELVARIRTVLRRTQQNGRSLDAGGTCYAFGDWVLREVERVLVDGKGSEV
ALSSGEYHLLHALVRHPRQVMSRDRLLDLVRGREADIFDRAIDNLVSRLRKKIEADPAHPQIVKTVWGGGYTLACEVKRL
GPAA
>Mature_243_residues
TDSDMPRILLIDDEPSIREPLGEYLTAQGFAVTDAASAAEARSVLRAKSVDLVVSDIMMPGEDGLSLTRHLRETSSIPVI
LLTARAEDTERIIGLEIGADDYVVKPFNPRELVARIRTVLRRTQQNGRSLDAGGTCYAFGDWVLREVERVLVDGKGSEVA
LSSGEYHLLHALVRHPRQVMSRDRLLDLVRGREADIFDRAIDNLVSRLRKKIEADPAHPQIVKTVWGGGYTLACEVKRLG
PAA

Specific function: The N-terminus of this protein is required for the transcriptional expression of both major outer membrane protein genes ompF and ompC; its C-terminal moiety mediates the multimerization of the ompR protein. As a multimer, it turns on the expression of th

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=232, Percent_Identity=47.4137931034483, Blast_Score=206, Evalue=9e-55,
Organism=Escherichia coli, GI1790863, Length=238, Percent_Identity=36.5546218487395, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1787229, Length=238, Percent_Identity=39.9159663865546, Blast_Score=160, Evalue=7e-41,
Organism=Escherichia coli, GI1788394, Length=240, Percent_Identity=35.4166666666667, Blast_Score=158, Evalue=3e-40,
Organism=Escherichia coli, GI1786599, Length=240, Percent_Identity=36.25, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI2367329, Length=236, Percent_Identity=39.4067796610169, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=34.5132743362832, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=34.5991561181435, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=36.1233480176211, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=34.070796460177, Blast_Score=116, Evalue=2e-27,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=33.920704845815, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1789402, Length=228, Percent_Identity=32.4561403508772, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI87082012, Length=231, Percent_Identity=29.8701298701299, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1790552, Length=231, Percent_Identity=32.034632034632, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790299, Length=188, Percent_Identity=32.4468085106383, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788550, Length=107, Percent_Identity=38.3177570093458, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788713, Length=101, Percent_Identity=38.6138613861386, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI145693157, Length=108, Percent_Identity=36.1111111111111, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788191, Length=127, Percent_Identity=31.496062992126, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26964; Mature: 26833

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDSDMPRILLIDDEPSIREPLGEYLTAQGFAVTDAASAAEARSVLRAKSVDLVVSDIMM
CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PGEDGLSLTRHLRETSSIPVILLTARAEDTERIIGLEIGADDYVVKPFNPRELVARIRTV
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHH
LRRTQQNGRSLDAGGTCYAFGDWVLREVERVLVDGKGSEVALSSGEYHLLHALVRHPRQV
HHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCHHHH
MSRDRLLDLVRGREADIFDRAIDNLVSRLRKKIEADPAHPQIVKTVWGGGYTLACEVKRL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCC
GPAA
CCCC
>Mature Secondary Structure 
TDSDMPRILLIDDEPSIREPLGEYLTAQGFAVTDAASAAEARSVLRAKSVDLVVSDIMM
CCCCCCEEEEECCCCCHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHCC
PGEDGLSLTRHLRETSSIPVILLTARAEDTERIIGLEIGADDYVVKPFNPRELVARIRTV
CCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEEECCCCEEECCCCHHHHHHHHHHH
LRRTQQNGRSLDAGGTCYAFGDWVLREVERVLVDGKGSEVALSSGEYHLLHALVRHPRQV
HHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCHHHH
MSRDRLLDLVRGREADIFDRAIDNLVSRLRKKIEADPAHPQIVKTVWGGGYTLACEVKRL
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEEECCC
GPAA
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]