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The map label for this gene is 103486226

Identifier: 103486226

GI number: 103486226

Start: 738816

End: 739130

Strand: Reverse

Name: 103486226

Synonym: Sala_0733

Alternate gene names: NA

Gene position: 739130-738816 (Counterclockwise)

Preceding gene: 103486227

Following gene: 103486225

Centisome position: 22.1

GC content: 63.17

Gene sequence:

>315_bases
ATGCACGCCGACTTTCAGCCCTGCGCCTATATCATGGCGAGCGCGCGGCACGGCACGCTCTACACCGGCGTCACGTCGCA
CCTGATCCAGCGCATCTGCCAGCACCGCGACGGCAGTTTCGACGGCTTCACCAAACGCTATGGCGTCAAGACGCTCGTCT
GGTTCGAACTCGCCGGGACGATGCACGCCGCGATCACGCGCGAAAAGCAAATCAAGAATTGGCAGCGCAAGTGGAAGATC
GAACTGATCGAGGCGGCGAACCCCGATTGGCGCGACTTGGCGGAGGAATTGGGGTTGCCGCCGCTGGGGGCGTAG

Upstream 100 bases:

>100_bases
CCGCTACGATAAACTCGCCAGGAATTTCCTGTCAGCCGTAAGCCTCGCAGCCGCCGTGGCCTTCTGGCTGTGATTGAGTC
TCGACCCTAGCCTCCATCCC

Downstream 100 bases:

>100_bases
CCCTGCGCCCCCACACCTGCCCTTCCTTCGTCATGCCGGACTTGATCCGGCATCCATTCTACGGCCGTTGCATGGACCCC
GGATCAAGTCCGGGGTGACG

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MHADFQPCAYIMASARHGTLYTGVTSHLIQRICQHRDGSFDGFTKRYGVKTLVWFELAGTMHAAITREKQIKNWQRKWKI
ELIEAANPDWRDLAEELGLPPLGA

Sequences:

>Translated_104_residues
MHADFQPCAYIMASARHGTLYTGVTSHLIQRICQHRDGSFDGFTKRYGVKTLVWFELAGTMHAAITREKQIKNWQRKWKI
ELIEAANPDWRDLAEELGLPPLGA
>Mature_104_residues
MHADFQPCAYIMASARHGTLYTGVTSHLIQRICQHRDGSFDGFTKRYGVKTLVWFELAGTMHAAITREKQIKNWQRKWKI
ELIEAANPDWRDLAEELGLPPLGA

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11912; Mature: 11912

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHADFQPCAYIMASARHGTLYTGVTSHLIQRICQHRDGSFDGFTKRYGVKTLVWFELAGT
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHH
MHAAITREKQIKNWQRKWKIELIEAANPDWRDLAEELGLPPLGA
HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHADFQPCAYIMASARHGTLYTGVTSHLIQRICQHRDGSFDGFTKRYGVKTLVWFELAGT
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHH
MHAAITREKQIKNWQRKWKIELIEAANPDWRDLAEELGLPPLGA
HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA