Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is surE [H]

Identifier: 103486214

GI number: 103486214

Start: 727399

End: 728220

Strand: Reverse

Name: surE [H]

Synonym: Sala_0721

Alternate gene names: 103486214

Gene position: 728220-727399 (Counterclockwise)

Preceding gene: 103486215

Following gene: 103486213

Centisome position: 21.77

GC content: 65.82

Gene sequence:

>822_bases
ATGCCGATGGGCATCTCGACTTCGCTCAATGCGAACGGAACCGAGAAAGAGAAAATGATGCGCATCCTCCTCACCAACGA
CGACGGTTATCACGCCCCCGGCATGGCGGTGCTCGAAGCGATCGCGCGTCAGCTGTCGGACGACATCTGGGTCTGCGCCC
CCGCCGAAGAGCAATCGGGCGCCGGCCATTCGCTCACCCTCTCGCGCCCTGTGCGCATCCGCGAACATGGGCCGCGGCGC
TGGTCGTGCAGCGGCACGCCGACCGATTCGGTGATGATGGCGATCGGCAAGCTGATGCCCGAAAAGCCCGACCTCATCCT
CTCGGGCGTCAACCGCGGCGCCAATCTGGGCGACGATATCACCTATTCGGGCACCGTCTCGGCGGCAATCGAAGGCGCGC
TCGCAGGCATCCGCTCGATTGCGCTGAGTCAGGTTTATGCGCGCGAAGGCATGGGCGACAGCGTCCCGTTCGAGGCCGCC
GAACAATGGGGCGCCCGGGTGCTCGCGCCGCTGATGACGATGGACATGGCGCCGCGCACGCTGATCAACATCAACTTCCC
CGCGATCCCCGCCGCCGAGGTGCAGGGAATCCGCGTCACGCGCCAGGGCTTTCACGATTATGGTCGCGGCTCGATCGTCG
AGGGCACGGACCCGCGCGGCTATCCCTATTACTGGTTCGGCCTCCACGGCATCGAGCACAGCCTCGGTCACGACAGCGAT
CTGGAAGCGATCGACGATCGCTTCATCTCGGTCACCCCGCTCCAGCTCGACCTGACGCACGACCCCTCGCTCGCCGCACT
CCGCGCGGCCTATGCTGGCTAG

Upstream 100 bases:

>100_bases
GCGGGATCACCCGGCTGACGCCCCTGGGTTGACAAGGTTAAACTGACTCCACTTTCCCGTTCGTGTCGAGCGAAGTCGAG
ACACCCAACGGCCTTGCGCC

Downstream 100 bases:

>100_bases
CATCGTCGCCCCCGCGAAGGCGGGGCCGCTGTCGGTTCACGCAGCGTCGAAGCAAAATGTCGCTAGCGGCCCCCGCCTTC
GCGGGGGCGACGTGCATTGG

Product: stationary phase survival protein SurE

Products: NA

Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPMGISTSLNANGTEKEKMMRILLTNDDGYHAPGMAVLEAIARQLSDDIWVCAPAEEQSGAGHSLTLSRPVRIREHGPRR
WSCSGTPTDSVMMAIGKLMPEKPDLILSGVNRGANLGDDITYSGTVSAAIEGALAGIRSIALSQVYAREGMGDSVPFEAA
EQWGARVLAPLMTMDMAPRTLININFPAIPAAEVQGIRVTRQGFHDYGRGSIVEGTDPRGYPYYWFGLHGIEHSLGHDSD
LEAIDDRFISVTPLQLDLTHDPSLAALRAAYAG

Sequences:

>Translated_273_residues
MPMGISTSLNANGTEKEKMMRILLTNDDGYHAPGMAVLEAIARQLSDDIWVCAPAEEQSGAGHSLTLSRPVRIREHGPRR
WSCSGTPTDSVMMAIGKLMPEKPDLILSGVNRGANLGDDITYSGTVSAAIEGALAGIRSIALSQVYAREGMGDSVPFEAA
EQWGARVLAPLMTMDMAPRTLININFPAIPAAEVQGIRVTRQGFHDYGRGSIVEGTDPRGYPYYWFGLHGIEHSLGHDSD
LEAIDDRFISVTPLQLDLTHDPSLAALRAAYAG
>Mature_272_residues
PMGISTSLNANGTEKEKMMRILLTNDDGYHAPGMAVLEAIARQLSDDIWVCAPAEEQSGAGHSLTLSRPVRIREHGPRRW
SCSGTPTDSVMMAIGKLMPEKPDLILSGVNRGANLGDDITYSGTVSAAIEGALAGIRSIALSQVYAREGMGDSVPFEAAE
QWGARVLAPLMTMDMAPRTLININFPAIPAAEVQGIRVTRQGFHDYGRGSIVEGTDPRGYPYYWFGLHGIEHSLGHDSDL
EAIDDRFISVTPLQLDLTHDPSLAALRAAYAG

Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates [H]

COG id: COG0496

COG function: function code R; Predicted acid phosphatase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surE nucleotidase family [H]

Homologues:

Organism=Escherichia coli, GI1789101, Length=242, Percent_Identity=38.8429752066116, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002828 [H]

Pfam domain/function: PF01975 SurE [H]

EC number: =3.1.3.5 [H]

Molecular weight: Translated: 29403; Mature: 29272

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMGISTSLNANGTEKEKMMRILLTNDDGYHAPGMAVLEAIARQLSDDIWVCAPAEEQSG
CCCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC
AGHSLTLSRPVRIREHGPRRWSCSGTPTDSVMMAIGKLMPEKPDLILSGVNRGANLGDDI
CCCEEEECCCEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
TYSGTVSAAIEGALAGIRSIALSQVYAREGMGDSVPFEAAEQWGARVLAPLMTMDMAPRT
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
LININFPAIPAAEVQGIRVTRQGFHDYGRGSIVEGTDPRGYPYYWFGLHGIEHSLGHDSD
EEEECCCCCCHHHHCCEEEEHHHHHHCCCCCEECCCCCCCCCEEEEEECCHHHHCCCCCC
LEAIDDRFISVTPLQLDLTHDPSLAALRAAYAG
HHHHCCCEEEEEEEEEEECCCCCHHHHHHHHCC
>Mature Secondary Structure 
PMGISTSLNANGTEKEKMMRILLTNDDGYHAPGMAVLEAIARQLSDDIWVCAPAEEQSG
CCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCC
AGHSLTLSRPVRIREHGPRRWSCSGTPTDSVMMAIGKLMPEKPDLILSGVNRGANLGDDI
CCCEEEECCCEECCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCC
TYSGTVSAAIEGALAGIRSIALSQVYAREGMGDSVPFEAAEQWGARVLAPLMTMDMAPRT
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCE
LININFPAIPAAEVQGIRVTRQGFHDYGRGSIVEGTDPRGYPYYWFGLHGIEHSLGHDSD
EEEECCCCCCHHHHCCEEEEHHHHHHCCCCCEECCCCCCCCCEEEEEECCHHHHCCCCCC
LEAIDDRFISVTPLQLDLTHDPSLAALRAAYAG
HHHHCCCEEEEEEEEEEECCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA