| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is gloB [H]
Identifier: 103486177
GI number: 103486177
Start: 693889
End: 694629
Strand: Reverse
Name: gloB [H]
Synonym: Sala_0684
Alternate gene names: 103486177
Gene position: 694629-693889 (Counterclockwise)
Preceding gene: 103486178
Following gene: 103486176
Centisome position: 20.77
GC content: 68.15
Gene sequence:
>741_bases GTGGCTGCACTCGAAATCGTCCGGATCCCGGTCCTCAGCGACAATTATGTCTGGCTGGTCCACGAGCCCGCCAGCGGCGC GACGATGGTGGTCGACCCGGCGGTCGCCGATCCGGTGCTCGACGCGGCGAAGGCGCGCGGCTGGGCGATCACCGACATCT GGAACACCCACTGGCACCCTGACCATACGGGCGGCAATGCCGCGATCAAGGAAGCGGCCAAGGCATGGGGCGGCTGCACG ATCACCGGCCCCGCGGCCGAACATGAACGCATCCCGACACTCGACGTGCTGGTAAAGGGCGGCGACACGGTGCGGCTGGG CGACCATGTCGCGGATGTCTGGGACGTCCCCGCGCACACCGCGGGCCATATCGCCTATCATTTTGCGGATGACGCCGCGA TCTTCGTCGGCGACACGATGTTCGCCATGGGGTGCGGCCGCCTGTTCGAGGGGACGGCCGAGCAGATGTTCGCCAATATG CAGAAGCTCAGGGCGCTCGACGATGCAACGCGCGTTTATTGTGCGCACGAATATACGCTGTCCAACGCGCGTTTCGCGAT CACCGTCGATCCGGCCAATGAGGCGCTGGCGGCGCGGCTTGCCGCGGTCGAGGCTGCCCGCGCGGCGGGCGAGGCGACGG TGCCGACGAGCATCGGCGCCGAGCGCGCGACAAACCCCTTTTTCCGCGCGCCCGACGCCGCGGAACTCGCGCGCATCCGC GCGCTCAAGGATGCGGCGTGA
Upstream 100 bases:
>100_bases GGAAGGCGAGACTTTCCGCGGCGACTGTGGCAGAGTGGCGCACCAAGGTCCGCCGGCATCCACTCCGTCTTGTGGGTGCA TGAGCTGCAAAGGAGGCATG
Downstream 100 bases:
>100_bases TACGCGGGCGGCTTCAGCACCGGTTCATCGGCCACGGCTATTCTGGCTGGTCGCAAGGAGCAATGTCATGGCCAAGCTGA ATCCGATGGCGGTCGCGCTG
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MAALEIVRIPVLSDNYVWLVHEPASGATMVVDPAVADPVLDAAKARGWAITDIWNTHWHPDHTGGNAAIKEAAKAWGGCT ITGPAAEHERIPTLDVLVKGGDTVRLGDHVADVWDVPAHTAGHIAYHFADDAAIFVGDTMFAMGCGRLFEGTAEQMFANM QKLRALDDATRVYCAHEYTLSNARFAITVDPANEALAARLAAVEAARAAGEATVPTSIGAERATNPFFRAPDAAELARIR ALKDAA
Sequences:
>Translated_246_residues MAALEIVRIPVLSDNYVWLVHEPASGATMVVDPAVADPVLDAAKARGWAITDIWNTHWHPDHTGGNAAIKEAAKAWGGCT ITGPAAEHERIPTLDVLVKGGDTVRLGDHVADVWDVPAHTAGHIAYHFADDAAIFVGDTMFAMGCGRLFEGTAEQMFANM QKLRALDDATRVYCAHEYTLSNARFAITVDPANEALAARLAAVEAARAAGEATVPTSIGAERATNPFFRAPDAAELARIR ALKDAA >Mature_245_residues AALEIVRIPVLSDNYVWLVHEPASGATMVVDPAVADPVLDAAKARGWAITDIWNTHWHPDHTGGNAAIKEAAKAWGGCTI TGPAAEHERIPTLDVLVKGGDTVRLGDHVADVWDVPAHTAGHIAYHFADDAAIFVGDTMFAMGCGRLFEGTAEQMFANMQ KLRALDDATRVYCAHEYTLSNARFAITVDPANEALAARLAAVEAARAAGEATVPTSIGAERATNPFFRAPDAAELARIRA LKDAA
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=237, Percent_Identity=35.4430379746835, Blast_Score=154, Evalue=9e-38, Organism=Homo sapiens, GI94538320, Length=235, Percent_Identity=35.7446808510638, Blast_Score=153, Evalue=1e-37, Organism=Homo sapiens, GI14150041, Length=231, Percent_Identity=35.9307359307359, Blast_Score=144, Evalue=7e-35, Organism=Homo sapiens, GI116642887, Length=232, Percent_Identity=32.3275862068966, Blast_Score=132, Evalue=3e-31, Organism=Homo sapiens, GI21703352, Length=232, Percent_Identity=32.3275862068966, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI46361987, Length=207, Percent_Identity=35.7487922705314, Blast_Score=125, Evalue=4e-29, Organism=Escherichia coli, GI1786406, Length=229, Percent_Identity=39.7379912663755, Blast_Score=161, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17536925, Length=235, Percent_Identity=34.468085106383, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6320478, Length=230, Percent_Identity=30, Blast_Score=96, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6324614, Length=234, Percent_Identity=28.6324786324786, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI21356335, Length=244, Percent_Identity=36.4754098360656, Blast_Score=170, Evalue=9e-43, Organism=Drosophila melanogaster, GI24667711, Length=244, Percent_Identity=36.4754098360656, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI24667703, Length=243, Percent_Identity=36.6255144032922, Blast_Score=169, Evalue=2e-42, Organism=Drosophila melanogaster, GI221330176, Length=171, Percent_Identity=30.4093567251462, Blast_Score=84, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 26147; Mature: 26015
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALEIVRIPVLSDNYVWLVHEPASGATMVVDPAVADPVLDAAKARGWAITDIWNTHWHP CCCEEEEEEEEECCCEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCC DHTGGNAAIKEAAKAWGGCTITGPAAEHERIPTLDVLVKGGDTVRLGDHVADVWDVPAHT CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCEEEECCHHHHHHCCCCCC AGHIAYHFADDAAIFVGDTMFAMGCGRLFEGTAEQMFANMQKLRALDDATRVYCAHEYTL CCEEEEEECCCEEEEECCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEE SNARFAITVDPANEALAARLAAVEAARAAGEATVPTSIGAERATNPFFRAPDAAELARIR CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH ALKDAA HHHCCC >Mature Secondary Structure AALEIVRIPVLSDNYVWLVHEPASGATMVVDPAVADPVLDAAKARGWAITDIWNTHWHP CCEEEEEEEEECCCEEEEEECCCCCCEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCC DHTGGNAAIKEAAKAWGGCTITGPAAEHERIPTLDVLVKGGDTVRLGDHVADVWDVPAHT CCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCEEEEEEECCCEEEECCHHHHHHCCCCCC AGHIAYHFADDAAIFVGDTMFAMGCGRLFEGTAEQMFANMQKLRALDDATRVYCAHEYTL CCEEEEEECCCEEEEECCHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEE SNARFAITVDPANEALAARLAAVEAARAAGEATVPTSIGAERATNPFFRAPDAAELARIR CCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH ALKDAA HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA