Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486176

Identifier: 103486176

GI number: 103486176

Start: 693375

End: 693899

Strand: Reverse

Name: 103486176

Synonym: Sala_0683

Alternate gene names: NA

Gene position: 693899-693375 (Counterclockwise)

Preceding gene: 103486177

Following gene: 103486172

Centisome position: 20.74

GC content: 65.9

Gene sequence:

>525_bases
ATGCGGCGTGATACGCGGGCGGCTTCAGCACCGGTTCATCGGCCACGGCTATTCTGGCTGGTCGCAAGGAGCAATGTCAT
GGCCAAGCTGAATCCGATGGCGGTCGCGCTGGCGATTGCTGCGGCGCCGCTCGCCGCAAGTTGCGCCCCCGCCGGAACCG
GCGAACCCGGCGCCGCGGCGCTCACCCCGAAACAGGCCGAGAGGCTGGAGAAGCAGCTTGCGGGCAAGGTGCCCGGCACG
CCGATCAGCTGCCTGCCCAATTACCGCACCAACGACACGATCCGCGTGTCCGACAGCATCCTTCTGTACCGCGCGAGCGG
CAACCTCGTCTATCGCAACGATCTCAAGGGCAGTTGCCCCGGCCTCGCGCGCGACAGCGACATCATGGTCGTGCGCCAGT
TCGGATCATCGACCTGCAGCGGCGATTTCTTTCACCTGGTCGACCGGACGAGCGGCATCCGTGGCCCGACCTGCGTTTTC
GGCGAGTTCGTTCCCTATCGCAAACCGGCAGGGAACGAAGGCTGA

Upstream 100 bases:

>100_bases
GAGGCGACGGTGCCGACGAGCATCGGCGCCGAGCGCGCGACAAACCCCTTTTTCCGCGCGCCCGACGCCGCGGAACTCGC
GCGCATCCGCGCGCTCAAGG

Downstream 100 bases:

>100_bases
GCCCCACGGGTTCGGTCGCGGGCGGGGACCGGTTTGCACCGATCTCTTCGGGTCGCACCCCGCCTGCAATTGTCAAGCGT
CGCCCCCGCGAAGGCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MRRDTRAASAPVHRPRLFWLVARSNVMAKLNPMAVALAIAAAPLAASCAPAGTGEPGAAALTPKQAERLEKQLAGKVPGT
PISCLPNYRTNDTIRVSDSILLYRASGNLVYRNDLKGSCPGLARDSDIMVVRQFGSSTCSGDFFHLVDRTSGIRGPTCVF
GEFVPYRKPAGNEG

Sequences:

>Translated_174_residues
MRRDTRAASAPVHRPRLFWLVARSNVMAKLNPMAVALAIAAAPLAASCAPAGTGEPGAAALTPKQAERLEKQLAGKVPGT
PISCLPNYRTNDTIRVSDSILLYRASGNLVYRNDLKGSCPGLARDSDIMVVRQFGSSTCSGDFFHLVDRTSGIRGPTCVF
GEFVPYRKPAGNEG
>Mature_174_residues
MRRDTRAASAPVHRPRLFWLVARSNVMAKLNPMAVALAIAAAPLAASCAPAGTGEPGAAALTPKQAERLEKQLAGKVPGT
PISCLPNYRTNDTIRVSDSILLYRASGNLVYRNDLKGSCPGLARDSDIMVVRQFGSSTCSGDFFHLVDRTSGIRGPTCVF
GEFVPYRKPAGNEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18530; Mature: 18530

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRDTRAASAPVHRPRLFWLVARSNVMAKLNPMAVALAIAAAPLAASCAPAGTGEPGAAA
CCCCCCCCCCCCCCCEEEEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
LTPKQAERLEKQLAGKVPGTPISCLPNYRTNDTIRVSDSILLYRASGNLVYRNDLKGSCP
ECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCCC
GLARDSDIMVVRQFGSSTCSGDFFHLVDRTSGIRGPTCVFGEFVPYRKPAGNEG
CCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRRDTRAASAPVHRPRLFWLVARSNVMAKLNPMAVALAIAAAPLAASCAPAGTGEPGAAA
CCCCCCCCCCCCCCCEEEEEEECCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCE
LTPKQAERLEKQLAGKVPGTPISCLPNYRTNDTIRVSDSILLYRASGNLVYRNDLKGSCP
ECHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCCC
GLARDSDIMVVRQFGSSTCSGDFFHLVDRTSGIRGPTCVFGEFVPYRKPAGNEG
CCCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA