| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486134
Identifier: 103486134
GI number: 103486134
Start: 654193
End: 654492
Strand: Reverse
Name: 103486134
Synonym: Sala_0641
Alternate gene names: NA
Gene position: 654492-654193 (Counterclockwise)
Preceding gene: 103486135
Following gene: 103486133
Centisome position: 19.57
GC content: 56.0
Gene sequence:
>300_bases ATGGGGGAACCGAAGGAGGGGGTTATGGGAGGACTCATTGTCGTTCTAGCAGTCGCATGGACAATCAGTCTATTTGCTTT CCGGCGGATGCCGCCGCATCGACGCGCGATTTTTACTGCCGGGTCCGCATGGCTAGTTTGTGCTGCCATATGGGGCTTCT TCTTGCCCAGTGGTTTCTACGGGGGGCTGATCGGATTTTCTATTGGCGCCGCCGTGGTCGGGGTCGAACGGTATATCCAT TATTCTAAGCATTGGACGGACGAACCGGGTACGGGCGACGAGGCTGAGATTTTTCGCTAG
Upstream 100 bases:
>100_bases ACGTGGATTGAGCATTGCTTGATGGCAGGATTATCGTAATTTCGTCAGCGTTTACCTTCCCTATGGTTGGGAATTATGTA AACTGTCACCGTAATGGGTA
Downstream 100 bases:
>100_bases GAGGGGGTATGGCAAGCGATGGTGATTGGTTCTGGCCGCTAGCTGGCGCGGCAGTTCTCGCATGGCTCGCCTATGATAAG TGGTGGAAAGAGGAAGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MGEPKEGVMGGLIVVLAVAWTISLFAFRRMPPHRRAIFTAGSAWLVCAAIWGFFLPSGFYGGLIGFSIGAAVVGVERYIH YSKHWTDEPGTGDEAEIFR
Sequences:
>Translated_99_residues MGEPKEGVMGGLIVVLAVAWTISLFAFRRMPPHRRAIFTAGSAWLVCAAIWGFFLPSGFYGGLIGFSIGAAVVGVERYIH YSKHWTDEPGTGDEAEIFR >Mature_98_residues GEPKEGVMGGLIVVLAVAWTISLFAFRRMPPHRRAIFTAGSAWLVCAAIWGFFLPSGFYGGLIGFSIGAAVVGVERYIHY SKHWTDEPGTGDEAEIFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10820; Mature: 10688
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEPKEGVMGGLIVVLAVAWTISLFAFRRMPPHRRAIFTAGSAWLVCAAIWGFFLPSGFY CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHCCCCHH GGLIGFSIGAAVVGVERYIHYSKHWTDEPGTGDEAEIFR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure GEPKEGVMGGLIVVLAVAWTISLFAFRRMPPHRRAIFTAGSAWLVCAAIWGFFLPSGFY CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHCCCCHH GGLIGFSIGAAVVGVERYIHYSKHWTDEPGTGDEAEIFR HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA