Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486133

Identifier: 103486133

GI number: 103486133

Start: 653681

End: 654184

Strand: Reverse

Name: 103486133

Synonym: Sala_0640

Alternate gene names: NA

Gene position: 654184-653681 (Counterclockwise)

Preceding gene: 103486134

Following gene: 103486132

Centisome position: 19.56

GC content: 56.94

Gene sequence:

>504_bases
ATGGCAAGCGATGGTGATTGGTTCTGGCCGCTAGCTGGCGCGGCAGTTCTCGCATGGCTCGCCTATGATAAGTGGTGGAA
AGAGGAAGAGCCGCCGTCGCCACCGCCCCCCATCTTCGCTCCTGTTTCGATCAGGCCTTCAGGCCTCGTTTACGTAACCG
AACTGGATAGTGGCGCTGTTTGGCGCGTGAACGCGGATAGCGTGAAAGGCGTACGATCAGACCGGACATTTTGGATCGAT
CAGGACCATTCCAAGAATAAATCCGAAAGAGCCCGTTCAATAATGACGCTTTACAGGGTAGATTGCGACAGCACCGCAAC
AGCCCGCCTAAGCCTCGTTGCTTATGACGGGGATGGCAACGTCCTGATTAAGCAAGACTCCCCCCACGCCGAGGAGACAT
TCACGCCTCCCGGCTCTGTTTTGGGCAGCGTATTCGACGAAGTCTGCAAGTCGGTTTATGATCCGCCTCCGGTAGCGCCG
CCTCCCCCTAGCCCTTCTCGTTAG

Upstream 100 bases:

>100_bases
CCGCCGTGGTCGGGGTCGAACGGTATATCCATTATTCTAAGCATTGGACGGACGAACCGGGTACGGGCGACGAGGCTGAG
ATTTTTCGCTAGGAGGGGGT

Downstream 100 bases:

>100_bases
AGTATCTGTAATGGAATTACGGTGACAGCTTGCTCAACCCCCAAACTCGCCCCCACCGCGGAAAATATCCTGTCCTACAC
AATCGCCCCGCGTTAGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MASDGDWFWPLAGAAVLAWLAYDKWWKEEEPPSPPPPIFAPVSIRPSGLVYVTELDSGAVWRVNADSVKGVRSDRTFWID
QDHSKNKSERARSIMTLYRVDCDSTATARLSLVAYDGDGNVLIKQDSPHAEETFTPPGSVLGSVFDEVCKSVYDPPPVAP
PPPSPSR

Sequences:

>Translated_167_residues
MASDGDWFWPLAGAAVLAWLAYDKWWKEEEPPSPPPPIFAPVSIRPSGLVYVTELDSGAVWRVNADSVKGVRSDRTFWID
QDHSKNKSERARSIMTLYRVDCDSTATARLSLVAYDGDGNVLIKQDSPHAEETFTPPGSVLGSVFDEVCKSVYDPPPVAP
PPPSPSR
>Mature_166_residues
ASDGDWFWPLAGAAVLAWLAYDKWWKEEEPPSPPPPIFAPVSIRPSGLVYVTELDSGAVWRVNADSVKGVRSDRTFWIDQ
DHSKNKSERARSIMTLYRVDCDSTATARLSLVAYDGDGNVLIKQDSPHAEETFTPPGSVLGSVFDEVCKSVYDPPPVAPP
PPSPSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18358; Mature: 18226

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDGDWFWPLAGAAVLAWLAYDKWWKEEEPPSPPPPIFAPVSIRPSGLVYVTELDSGAV
CCCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEE
WRVNADSVKGVRSDRTFWIDQDHSKNKSERARSIMTLYRVDCDSTATARLSLVAYDGDGN
EEEEHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCCCCEEEEEEEEECCCCC
VLIKQDSPHAEETFTPPGSVLGSVFDEVCKSVYDPPPVAPPPPSPSR
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASDGDWFWPLAGAAVLAWLAYDKWWKEEEPPSPPPPIFAPVSIRPSGLVYVTELDSGAV
CCCCCEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCEE
WRVNADSVKGVRSDRTFWIDQDHSKNKSERARSIMTLYRVDCDSTATARLSLVAYDGDGN
EEEEHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHEECCCCCCCEEEEEEEEECCCCC
VLIKQDSPHAEETFTPPGSVLGSVFDEVCKSVYDPPPVAPPPPSPSR
EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA