Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486116

Identifier: 103486116

GI number: 103486116

Start: 634108

End: 634782

Strand: Reverse

Name: 103486116

Synonym: Sala_0623

Alternate gene names: NA

Gene position: 634782-634108 (Counterclockwise)

Preceding gene: 103486117

Following gene: 103486114

Centisome position: 18.98

GC content: 64.59

Gene sequence:

>675_bases
ATGAGCAAATATGAACCCGTCGCCAAGGCGCCGGTCCGCATCCAGCAGAATATCCTCGCGCGCGGCGAGCGCCGCCTGCT
CAACTGGCTGTGCGCGCGGCTGCCCGCGTGGGTGACGCCCGACCAGCTCACCGCGCTCGGCTTTGCAGGCGCGGTGCTCG
TCGCCGCGGGGTATCTGCTCAGCTGGTTCGACAGCGAATGGCTGGGGCTGTGCCTTGTCGGCTATATCGTCAACTGGTTC
GGCGATTCGCTCGACGGCAGCCTGGCGCGCTGGCGGGGGATCGAGCGGCCGAATTATGGTTATTTCGTCGATCACAGCGT
CGATGCGATCGCGACCTTCCTGATGATCAGCGCGATCGGCATGAGCCCCTATATGCGGCTCGACGTCGCGCTGATGGGCG
TGATCGGCTATTTCCTGCTGTCGATCCACACCTTCATTTCGGCGAAGATTCTGGGCGAGTTCCGCCTGTCCTATATGGCG
GGCGGGCCGACCGAACTGCGGCTGATGCTGATGGCGATGACCGCGCTCATGCCCGTCGTCGGCGGCGCCGACGTTGCCGG
AACCAATTTTTCGGCGTTCGACCTGTTCGCGCTCGTCGTCGCGAGCATCCTCGTCACGCTGTTTGTCGTCCAGACGTCGA
TGACCGCGCGGATGCTGCGCCGCCGCGGCAACTGA

Upstream 100 bases:

>100_bases
CGGCGAACGCGCTGCCCTTTCGCATTTGCGACTTTGCTTCTATGACGGCTCGATGACATCCGGCTGGCGCTTTTGTGACA
GACGGCAGCAGAGGGCCCGC

Downstream 100 bases:

>100_bases
AAGGCTCAGGGACGCGGGCGCGCCTGCGGATAAGTGCCGAGCAGGCGCAGCGACTTGGTCTGGAAATCCAGCTCCTCCAG
CGCGCGGTCGACACGTTCGT

Product: CDP-alcohol phosphatidyltransferase

Products: NA

Alternate protein names: PgsA-Like Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSKYEPVAKAPVRIQQNILARGERRLLNWLCARLPAWVTPDQLTALGFAGAVLVAAGYLLSWFDSEWLGLCLVGYIVNWF
GDSLDGSLARWRGIERPNYGYFVDHSVDAIATFLMISAIGMSPYMRLDVALMGVIGYFLLSIHTFISAKILGEFRLSYMA
GGPTELRLMLMAMTALMPVVGGADVAGTNFSAFDLFALVVASILVTLFVVQTSMTARMLRRRGN

Sequences:

>Translated_224_residues
MSKYEPVAKAPVRIQQNILARGERRLLNWLCARLPAWVTPDQLTALGFAGAVLVAAGYLLSWFDSEWLGLCLVGYIVNWF
GDSLDGSLARWRGIERPNYGYFVDHSVDAIATFLMISAIGMSPYMRLDVALMGVIGYFLLSIHTFISAKILGEFRLSYMA
GGPTELRLMLMAMTALMPVVGGADVAGTNFSAFDLFALVVASILVTLFVVQTSMTARMLRRRGN
>Mature_223_residues
SKYEPVAKAPVRIQQNILARGERRLLNWLCARLPAWVTPDQLTALGFAGAVLVAAGYLLSWFDSEWLGLCLVGYIVNWFG
DSLDGSLARWRGIERPNYGYFVDHSVDAIATFLMISAIGMSPYMRLDVALMGVIGYFLLSIHTFISAKILGEFRLSYMAG
GPTELRLMLMAMTALMPVVGGADVAGTNFSAFDLFALVVASILVTLFVVQTSMTARMLRRRGN

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24671; Mature: 24540

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYEPVAKAPVRIQQNILARGERRLLNWLCARLPAWVTPDQLTALGFAGAVLVAAGYLL
CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SWFDSEWLGLCLVGYIVNWFGDSLDGSLARWRGIERPNYGYFVDHSVDAIATFLMISAIG
HHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHC
MSPYMRLDVALMGVIGYFLLSIHTFISAKILGEFRLSYMAGGPTELRLMLMAMTALMPVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GGADVAGTNFSAFDLFALVVASILVTLFVVQTSMTARMLRRRGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKYEPVAKAPVRIQQNILARGERRLLNWLCARLPAWVTPDQLTALGFAGAVLVAAGYLL
CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
SWFDSEWLGLCLVGYIVNWFGDSLDGSLARWRGIERPNYGYFVDHSVDAIATFLMISAIG
HHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHC
MSPYMRLDVALMGVIGYFLLSIHTFISAKILGEFRLSYMAGGPTELRLMLMAMTALMPVV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
GGADVAGTNFSAFDLFALVVASILVTLFVVQTSMTARMLRRRGN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA