| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486117
Identifier: 103486117
GI number: 103486117
Start: 634902
End: 635393
Strand: Reverse
Name: 103486117
Synonym: Sala_0624
Alternate gene names: NA
Gene position: 635393-634902 (Counterclockwise)
Preceding gene: 103486118
Following gene: 103486116
Centisome position: 18.99
GC content: 72.97
Gene sequence:
>492_bases TTGATCGCTGCCCTGCTGTTCGCCGCGGCGCTGACCGCCGATCCCGCTGCGACGCCGTCGGAAGCCCCGGTCGCGCACCC CGCGCCGGTTGCCGATACCGACCTGCGCGAATTTGCCGCGATCGCGGGGCGCAAGGTCGCGGGACGACCGGTCGGGGGGC CCTGGCCGACCGCCGACAAGGTGCTGCTCATCGCGCGCGACGACAAGGGGTATCCGGTGGTCGCCGCCAGCCTGGGCTTT CCCGTGCGCCAGTCGCTCCCCGCGCCGCCCGACGGGACGCTGGCGGTGGTGCGGCTGCACCAGCGGTCCGAAACGATTGT GCCCGGCCCGACCGCCGACGACCTGGCCTTCGTCGCCGCCAACAAGCTGCCCCTGTTCGTCATCGGCGAATGGGCGCGCC CGGCGCCGATGTGGGAGGTCGCATGGGTCGATGGCGCGGTGCGCTTCCGCACGATCGGCGAGGTCGGTGAAATCGGTCCC TGGCGCGACTGA
Upstream 100 bases:
>100_bases TGATCCGCGCGGTGATGATGGGCGCCGCCGAGCCGGCGCTCAAACTCTCGGTCCCGCTGGAGGTCGAGATCGGCACAGGT AAGAGCTGGGGCGACGCGCA
Downstream 100 bases:
>100_bases TTGCTGCCCAGGTGCGGCGCGGCGAACGCGCTGCCCTTTCGCATTTGCGACTTTGCTTCTATGACGGCTCGATGACATCC GGCTGGCGCTTTTGTGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 163
Protein sequence:
>163_residues MIAALLFAAALTADPAATPSEAPVAHPAPVADTDLREFAAIAGRKVAGRPVGGPWPTADKVLLIARDDKGYPVVAASLGF PVRQSLPAPPDGTLAVVRLHQRSETIVPGPTADDLAFVAANKLPLFVIGEWARPAPMWEVAWVDGAVRFRTIGEVGEIGP WRD
Sequences:
>Translated_163_residues MIAALLFAAALTADPAATPSEAPVAHPAPVADTDLREFAAIAGRKVAGRPVGGPWPTADKVLLIARDDKGYPVVAASLGF PVRQSLPAPPDGTLAVVRLHQRSETIVPGPTADDLAFVAANKLPLFVIGEWARPAPMWEVAWVDGAVRFRTIGEVGEIGP WRD >Mature_163_residues MIAALLFAAALTADPAATPSEAPVAHPAPVADTDLREFAAIAGRKVAGRPVGGPWPTADKVLLIARDDKGYPVVAASLGF PVRQSLPAPPDGTLAVVRLHQRSETIVPGPTADDLAFVAANKLPLFVIGEWARPAPMWEVAWVDGAVRFRTIGEVGEIGP WRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17128; Mature: 17128
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAALLFAAALTADPAATPSEAPVAHPAPVADTDLREFAAIAGRKVAGRPVGGPWPTADK CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC VLLIARDDKGYPVVAASLGFPVRQSLPAPPDGTLAVVRLHQRSETIVPGPTADDLAFVAA EEEEEECCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEECCCCEECCCCCCCCEEEEEC NKLPLFVIGEWARPAPMWEVAWVDGAVRFRTIGEVGEIGPWRD CCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC >Mature Secondary Structure MIAALLFAAALTADPAATPSEAPVAHPAPVADTDLREFAAIAGRKVAGRPVGGPWPTADK CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC VLLIARDDKGYPVVAASLGFPVRQSLPAPPDGTLAVVRLHQRSETIVPGPTADDLAFVAA EEEEEECCCCCEEEEECCCCCHHHCCCCCCCCCEEEEEEECCCCEECCCCCCCCEEEEEC NKLPLFVIGEWARPAPMWEVAWVDGAVRFRTIGEVGEIGPWRD CCCEEEEEECCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA