| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103486091
Identifier: 103486091
GI number: 103486091
Start: 606733
End: 607476
Strand: Reverse
Name: 103486091
Synonym: Sala_0598
Alternate gene names: NA
Gene position: 607476-606733 (Counterclockwise)
Preceding gene: 103486092
Following gene: 103486090
Centisome position: 18.16
GC content: 70.43
Gene sequence:
>744_bases ATGATCCGTTCGCTGACCCTTGCCCTGCTGCTCGCCGCGGGCCCGCTCGCCGCGGCGCAGACGGCCGCTCCCGACTATGC CGCGGCGCTCGCCGATCCCGCGCGTCCCGCCGCCGACCGGGCCCGCGACGCCGAGCGCAAGCCGGCCGAGCTGCTCGCGT TCGCCGAAATCGCGCCGGGCGAGAAGGTCGGCGATTTCGTCATGGGGAGCGGCTATGTCACGCGCCTGCTCGCCGCCGCG GTCGGCCCGGCGGGCAAGGTTTATGCCTTCCAGCCCGCCGAGTTCATCGCCTTCCGCAAACAATATGGCGACGACCAGGC AGCGGTCGATGCCGCCTATGACAATGTCGATGCGGTCGGCGGACCGTTCGCGGCGCCCGCCTTTCCCGAACCGCTCGACA CGATCGTCACCGTCCAGAACTTCCACGATCTCTACCTCAAACCCTTTCCCGAAGGCACGGGCGCCAGGGGGAGCGCGGCG CTGTTCGCCGCGCTGAAACCGGGCGGCACGCTGGTCGTCGTCGATCATAGCGCGCCGGGCGGCAGCGGCACGGCGCTGTC CGACAGCCTGCACCGGATCGACAAGGCGGCGGTGGTCGCGGCGCTGACCGGCGCCGGCTTCACGCTCGAGGCCGAAAGCG ACCTCTATGCCCGCGTCGACGATCCGCGCACCGCCAATGTTTTCGACGCGGCGATTCGCGGCAAGACCGACCAGTTCACG CTGCGTTTCCGCAAGCCGGGGTGA
Upstream 100 bases:
>100_bases CGAGCCGACGCTGCCGTCGGATTTGATGGAACGATAGCCGCGATATCCGTTGGAGCGGCGAACTGTTATAGCGGTGCGAT ACACCAGAGGAGTCGATGCC
Downstream 100 bases:
>100_bases CGAGCCGAAAGCTCGGGTCGGACGCGGGGGTCGACCGGCGTGCTTGGGCGCGAACGGCTGTCGCTGAAATGTCACAACGG CGCCATCGTTGCCCCGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; Methyltransferase-Like Protein
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPGEKVGDFVMGSGYVTRLLAAA VGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVGGPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAA LFAALKPGGTLVVVDHSAPGGSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT LRFRKPG
Sequences:
>Translated_247_residues MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPGEKVGDFVMGSGYVTRLLAAA VGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVGGPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAA LFAALKPGGTLVVVDHSAPGGSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT LRFRKPG >Mature_247_residues MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPGEKVGDFVMGSGYVTRLLAAA VGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVGGPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAA LFAALKPGGTLVVVDHSAPGGSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT LRFRKPG
Specific function: Unknown
COG id: COG4798
COG function: function code R; Predicted methyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25558; Mature: 25558
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPG CCHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC EKVGDFVMGSGYVTRLLAAAVGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVG CCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCCC GPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAALFAALKPGGTLVVVDHSAPG CCCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCC GSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCHHHHHHHCCCCCEEE LRFRKPG EEEECCC >Mature Secondary Structure MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPG CCHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC EKVGDFVMGSGYVTRLLAAAVGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVG CCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCCC GPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAALFAALKPGGTLVVVDHSAPG CCCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCC GSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCHHHHHHHCCCCCEEE LRFRKPG EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA