Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

Click here to switch to the map view.

The map label for this gene is 103486091

Identifier: 103486091

GI number: 103486091

Start: 606733

End: 607476

Strand: Reverse

Name: 103486091

Synonym: Sala_0598

Alternate gene names: NA

Gene position: 607476-606733 (Counterclockwise)

Preceding gene: 103486092

Following gene: 103486090

Centisome position: 18.16

GC content: 70.43

Gene sequence:

>744_bases
ATGATCCGTTCGCTGACCCTTGCCCTGCTGCTCGCCGCGGGCCCGCTCGCCGCGGCGCAGACGGCCGCTCCCGACTATGC
CGCGGCGCTCGCCGATCCCGCGCGTCCCGCCGCCGACCGGGCCCGCGACGCCGAGCGCAAGCCGGCCGAGCTGCTCGCGT
TCGCCGAAATCGCGCCGGGCGAGAAGGTCGGCGATTTCGTCATGGGGAGCGGCTATGTCACGCGCCTGCTCGCCGCCGCG
GTCGGCCCGGCGGGCAAGGTTTATGCCTTCCAGCCCGCCGAGTTCATCGCCTTCCGCAAACAATATGGCGACGACCAGGC
AGCGGTCGATGCCGCCTATGACAATGTCGATGCGGTCGGCGGACCGTTCGCGGCGCCCGCCTTTCCCGAACCGCTCGACA
CGATCGTCACCGTCCAGAACTTCCACGATCTCTACCTCAAACCCTTTCCCGAAGGCACGGGCGCCAGGGGGAGCGCGGCG
CTGTTCGCCGCGCTGAAACCGGGCGGCACGCTGGTCGTCGTCGATCATAGCGCGCCGGGCGGCAGCGGCACGGCGCTGTC
CGACAGCCTGCACCGGATCGACAAGGCGGCGGTGGTCGCGGCGCTGACCGGCGCCGGCTTCACGCTCGAGGCCGAAAGCG
ACCTCTATGCCCGCGTCGACGATCCGCGCACCGCCAATGTTTTCGACGCGGCGATTCGCGGCAAGACCGACCAGTTCACG
CTGCGTTTCCGCAAGCCGGGGTGA

Upstream 100 bases:

>100_bases
CGAGCCGACGCTGCCGTCGGATTTGATGGAACGATAGCCGCGATATCCGTTGGAGCGGCGAACTGTTATAGCGGTGCGAT
ACACCAGAGGAGTCGATGCC

Downstream 100 bases:

>100_bases
CGAGCCGAAAGCTCGGGTCGGACGCGGGGGTCGACCGGCGTGCTTGGGCGCGAACGGCTGTCGCTGAAATGTCACAACGG
CGCCATCGTTGCCCCGGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Methyltransferase Type; Methyltransferase-Like Protein

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPGEKVGDFVMGSGYVTRLLAAA
VGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVGGPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAA
LFAALKPGGTLVVVDHSAPGGSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT
LRFRKPG

Sequences:

>Translated_247_residues
MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPGEKVGDFVMGSGYVTRLLAAA
VGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVGGPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAA
LFAALKPGGTLVVVDHSAPGGSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT
LRFRKPG
>Mature_247_residues
MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPGEKVGDFVMGSGYVTRLLAAA
VGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVGGPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAA
LFAALKPGGTLVVVDHSAPGGSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT
LRFRKPG

Specific function: Unknown

COG id: COG4798

COG function: function code R; Predicted methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25558; Mature: 25558

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPG
CCHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
EKVGDFVMGSGYVTRLLAAAVGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVG
CCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
GPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAALFAALKPGGTLVVVDHSAPG
CCCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCC
GSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCHHHHHHHCCCCCEEE
LRFRKPG
EEEECCC
>Mature Secondary Structure
MIRSLTLALLLAAGPLAAAQTAAPDYAAALADPARPAADRARDAERKPAELLAFAEIAPG
CCHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHCCCC
EKVGDFVMGSGYVTRLLAAAVGPAGKVYAFQPAEFIAFRKQYGDDQAAVDAAYDNVDAVG
CCCCCEEECCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCHHHHHHHHCCCCCCC
GPFAAPAFPEPLDTIVTVQNFHDLYLKPFPEGTGARGSAALFAALKPGGTLVVVDHSAPG
CCCCCCCCCCCHHHHEECCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCC
GSGTALSDSLHRIDKAAVVAALTGAGFTLEAESDLYARVDDPRTANVFDAAIRGKTDQFT
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCHHHHHHHCCCCCEEE
LRFRKPG
EEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA