Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486089

Identifier: 103486089

GI number: 103486089

Start: 603804

End: 605306

Strand: Reverse

Name: 103486089

Synonym: Sala_0596

Alternate gene names: NA

Gene position: 605306-603804 (Counterclockwise)

Preceding gene: 103486090

Following gene: 103486087

Centisome position: 18.09

GC content: 66.0

Gene sequence:

>1503_bases
ATGGACAAGCCGCGGCAGGGCTTTGCCGGCCTGTGGAATATCAGCTTCGGCTTTTTCGGCATCCAGATCGGCTTTGCGCT
GCAAAATGCGAATATGAGCCGCATCTTCCAGTCGCTCGGCGAGGATATCGAGCGGCTGCCCGGTCTGTGGGTCGCCGCGC
CGCTGACCGGGCTGCTCGTCCAGCCGATCGTCGGGCATCTGAGCGACAGGACCTGGCTCGGCCGCCTCGGTCGGCGCCGG
CCCTATTTCCTGGCGGGGGCGATCCTCGCCGCGATCGCGCTGTTCGCGATGCCCGAAAGCCCGGCCATCTGGTTCGCGGC
GGCGATGCTGTGGCTGCTCGACGCCTCGCTCAACATTTCGATGGAGCCGTTCCGCGCCTTTGTCGGCGACATGTTGAGGA
AGGACCAGCATAGCGCGGGCTATGCGGTGCAGACCGCCTTCATCGGGGCGGGCGCGGTCGTCGGATCGCTGTTTCCCGCG
GCGATGGAGGCGATGGGGGTCGCCAATGTCGCGCCGCCGGGACAGATTCCCGATACGGTCAAATATGCCTTCTGGTTCGG
CGGCGCGGCGCTGTTCCTGTCGGTGCTGTGGACGATCGTGACGACGCACGAATATGACCCGGCAACCATGGCCGCCTTTG
CGGCATCAAGCCCCGTGGCGGCCGCGCTACCCGCGCAGGACCTGGCCGCACGCAGCTATGGCACCGGCCTGGTCTGGATC
GCCGCGGGCATTGCGGTCGCCGCGATCCAGCAGCATTTCGCGCTGCTGCGCGAGGTGCTGCTGCTCGGCGCGCTGCTCAT
CGCCTATGGGCTGGCGAGCATCGCCGCGATCGCGATGGCGCGGCGCGGACACAGCACCAATATGCTGGCGAGCATCATCG
GCGATTTCGCCGGGATGCCGCTGCTGATGAAGCGGCTCGCGCTCGTACAATTCTTCAGCTGGTCGGCGCTGTTCATCATG
TGGATCAACACGACGCCGATCGTCGCCCAATATCATTATGGCGCGCTCGACGCCGCGAGCGCCGACTATCAGGCGGCGGC
GAACTGGGTCGGCCAGCTGTTCGCCATCTATAACGGCGTCGCGGCGGTGGCGGCGCTGACCCTGCTGCCGTGGCTGTCGC
GGCGGCTGGGGCAGGCGCCAACGCACATGATCGGCCTTGGCTGCGGGGCGATTGGCTTTGCCAGCTTCTTCATGCTGCGC
GATCCGGCGCTGCTGATCGTCAGCGAGATTTTCATCGGCATCTTCTGGGCCTCGGTGCTCGCCATGCCTTATGCGATCCT
CGCGTCGAGCCTGCCGCAGGCAAAGCTCGGCATCTATATGGGATTGTTCAACGTCTTCATCGTGATCCCGCAGCTGCTCG
TCGCGGCGCTGATGGGATCGGTGATGAAGGCGTTCTTCCCCGGCGAGCCCATCCATACGATGGCGTTCGCCGCGATCACG
CTGCTCGTCGCGATCGCCGCCATGGCGCGCATCGTACCGATGCTCGCCAGGCAGCGGGGCTGA

Upstream 100 bases:

>100_bases
ATTCGTATACGCAAGCCGCCAAGCCGCTTGCCCTGCCCGCCGCACGCTGCAACACCGGACACCATGAGAGCCGCGCGCGC
GGCCCGTCGGGGAGAGACGC

Downstream 100 bases:

>100_bases
TACAGCACCGAAACGCCCGGCCCGACTCAACCGTCGATCAGCATGATCGCATCCGCCATCAGCGCGGCCGCCTCGTCCGG
GCTGCAGGAACCGGCCAGCG

Product: major facilitator transporter

Products: NA

Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; MFS Superfamily Sugcific Permease; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MDKPRQGFAGLWNISFGFFGIQIGFALQNANMSRIFQSLGEDIERLPGLWVAAPLTGLLVQPIVGHLSDRTWLGRLGRRR
PYFLAGAILAAIALFAMPESPAIWFAAAMLWLLDASLNISMEPFRAFVGDMLRKDQHSAGYAVQTAFIGAGAVVGSLFPA
AMEAMGVANVAPPGQIPDTVKYAFWFGGAALFLSVLWTIVTTHEYDPATMAAFAASSPVAAALPAQDLAARSYGTGLVWI
AAGIAVAAIQQHFALLREVLLLGALLIAYGLASIAAIAMARRGHSTNMLASIIGDFAGMPLLMKRLALVQFFSWSALFIM
WINTTPIVAQYHYGALDAASADYQAAANWVGQLFAIYNGVAAVAALTLLPWLSRRLGQAPTHMIGLGCGAIGFASFFMLR
DPALLIVSEIFIGIFWASVLAMPYAILASSLPQAKLGIYMGLFNVFIVIPQLLVAALMGSVMKAFFPGEPIHTMAFAAIT
LLVAIAAMARIVPMLARQRG

Sequences:

>Translated_500_residues
MDKPRQGFAGLWNISFGFFGIQIGFALQNANMSRIFQSLGEDIERLPGLWVAAPLTGLLVQPIVGHLSDRTWLGRLGRRR
PYFLAGAILAAIALFAMPESPAIWFAAAMLWLLDASLNISMEPFRAFVGDMLRKDQHSAGYAVQTAFIGAGAVVGSLFPA
AMEAMGVANVAPPGQIPDTVKYAFWFGGAALFLSVLWTIVTTHEYDPATMAAFAASSPVAAALPAQDLAARSYGTGLVWI
AAGIAVAAIQQHFALLREVLLLGALLIAYGLASIAAIAMARRGHSTNMLASIIGDFAGMPLLMKRLALVQFFSWSALFIM
WINTTPIVAQYHYGALDAASADYQAAANWVGQLFAIYNGVAAVAALTLLPWLSRRLGQAPTHMIGLGCGAIGFASFFMLR
DPALLIVSEIFIGIFWASVLAMPYAILASSLPQAKLGIYMGLFNVFIVIPQLLVAALMGSVMKAFFPGEPIHTMAFAAIT
LLVAIAAMARIVPMLARQRG
>Mature_500_residues
MDKPRQGFAGLWNISFGFFGIQIGFALQNANMSRIFQSLGEDIERLPGLWVAAPLTGLLVQPIVGHLSDRTWLGRLGRRR
PYFLAGAILAAIALFAMPESPAIWFAAAMLWLLDASLNISMEPFRAFVGDMLRKDQHSAGYAVQTAFIGAGAVVGSLFPA
AMEAMGVANVAPPGQIPDTVKYAFWFGGAALFLSVLWTIVTTHEYDPATMAAFAASSPVAAALPAQDLAARSYGTGLVWI
AAGIAVAAIQQHFALLREVLLLGALLIAYGLASIAAIAMARRGHSTNMLASIIGDFAGMPLLMKRLALVQFFSWSALFIM
WINTTPIVAQYHYGALDAASADYQAAANWVGQLFAIYNGVAAVAALTLLPWLSRRLGQAPTHMIGLGCGAIGFASFFMLR
DPALLIVSEIFIGIFWASVLAMPYAILASSLPQAKLGIYMGLFNVFIVIPQLLVAALMGSVMKAFFPGEPIHTMAFAAIT
LLVAIAAMARIVPMLARQRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53387; Mature: 53387

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA