Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486087

Identifier: 103486087

GI number: 103486087

Start: 602400

End: 603122

Strand: Reverse

Name: 103486087

Synonym: Sala_0594

Alternate gene names: NA

Gene position: 603122-602400 (Counterclockwise)

Preceding gene: 103486089

Following gene: 103486086

Centisome position: 18.03

GC content: 64.59

Gene sequence:

>723_bases
ATGTCTGCCCAGACCACCGAGATCGCCGACGGCATTTTCCGGCTGTCGGTTTTCGTCCCCGACATCGAACCGCCGGCGGG
CTTCACCTTCAACAGCTTCCTGATCCTCGATGACGAGCCGCTGCTTTTTCACGCCGGTCAGCGAAGCATGTTTCCGCTTT
TTTCGGCGGCCGTCGAAGCGTTGATGCCACTCGACCGGCTGCGCTGGCTGAGTTTCGGCCATGTCGAGGCCGACGAATGT
GGCGCGATGAATCTGTGGTTGCAGGCGGCGCCGCATGCGCAGGTCGTGCACGGCGAAACCGCCTGCTCGATCTCGCTCAA
CGATCTTGCGGATCGGGCGCCGCGCGTGGTGCAGGACGGCGAACTGATCACGGCGGGCCGACGCCGCATCCGCTATTTCG
ACACCCCGCACGTCCCGCATGCGTGGGAGTCGGGCGTGATTTTCGAAGAAACGTCGGCAACGCTGTTCTGCGGCGACCTG
TTCACGCAGTTCGGATCCCGGGAGATGACGCGCGACGATATTGTCGCCGCTGCGATCGCCGCCGAAGACGCTTTTCATGC
GACCAGCCTCGGGCTGGCCACGGCGCCCACCATCCGTCGCCTCGCCGATCTGCAACCGCGCACGCTCGCGTTGATGCACG
GGCCGACATTTCAGGGCGATGGGGCGCACGCGCTGCGGCGACTGGCGGACTATTTCGAGGAAATGCTGCGTCAGCCGGCA
TGA

Upstream 100 bases:

>100_bases
GTAGGATCGTTTGGGCCGGTCATTTTGCTCAGGGGGATTTGACATGCTCCGTTTTTAGTTGCACATATGTGTGCAGTCAA
TTCCCAGATGGAGCGCCTAT

Downstream 100 bases:

>100_bases
CCCTTTCGGCATGACCGGGACGGATGCCGACGCAGGCATTGGCATCGCAACGATGGGGCGACACGAACCCGCTGCGCTGA
GTATGGCGCGCCCGGCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Beta-Lactamase Domain-Containing Protein; Lactamase B; Flavoprotein; Metallo-Beta-Lactamase Domain Protein

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSAQTTEIADGIFRLSVFVPDIEPPAGFTFNSFLILDDEPLLFHAGQRSMFPLFSAAVEALMPLDRLRWLSFGHVEADEC
GAMNLWLQAAPHAQVVHGETACSISLNDLADRAPRVVQDGELITAGRRRIRYFDTPHVPHAWESGVIFEETSATLFCGDL
FTQFGSREMTRDDIVAAAIAAEDAFHATSLGLATAPTIRRLADLQPRTLALMHGPTFQGDGAHALRRLADYFEEMLRQPA

Sequences:

>Translated_240_residues
MSAQTTEIADGIFRLSVFVPDIEPPAGFTFNSFLILDDEPLLFHAGQRSMFPLFSAAVEALMPLDRLRWLSFGHVEADEC
GAMNLWLQAAPHAQVVHGETACSISLNDLADRAPRVVQDGELITAGRRRIRYFDTPHVPHAWESGVIFEETSATLFCGDL
FTQFGSREMTRDDIVAAAIAAEDAFHATSLGLATAPTIRRLADLQPRTLALMHGPTFQGDGAHALRRLADYFEEMLRQPA
>Mature_239_residues
SAQTTEIADGIFRLSVFVPDIEPPAGFTFNSFLILDDEPLLFHAGQRSMFPLFSAAVEALMPLDRLRWLSFGHVEADECG
AMNLWLQAAPHAQVVHGETACSISLNDLADRAPRVVQDGELITAGRRRIRYFDTPHVPHAWESGVIFEETSATLFCGDLF
TQFGSREMTRDDIVAAAIAAEDAFHATSLGLATAPTIRRLADLQPRTLALMHGPTFQGDGAHALRRLADYFEEMLRQPA

Specific function: Unknown

COG id: COG0426

COG function: function code C; Uncharacterized flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26467; Mature: 26336

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAQTTEIADGIFRLSVFVPDIEPPAGFTFNSFLILDDEPLLFHAGQRSMFPLFSAAVEA
CCCCHHHHHHHEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHH
LMPLDRLRWLSFGHVEADECGAMNLWLQAAPHAQVVHGETACSISLNDLADRAPRVVQDG
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEHHHHHHHCCCEECCC
ELITAGRRRIRYFDTPHVPHAWESGVIFEETSATLFCGDLFTQFGSREMTRDDIVAAAIA
CEEECCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEHHHHHHHCCCCCCHHHHHHHHHH
AEDAFHATSLGLATAPTIRRLADLQPRTLALMHGPTFQGDGAHALRRLADYFEEMLRQPA
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAQTTEIADGIFRLSVFVPDIEPPAGFTFNSFLILDDEPLLFHAGQRSMFPLFSAAVEA
CCCHHHHHHHEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHH
LMPLDRLRWLSFGHVEADECGAMNLWLQAAPHAQVVHGETACSISLNDLADRAPRVVQDG
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEEEHHHHHHHCCCEECCC
ELITAGRRRIRYFDTPHVPHAWESGVIFEETSATLFCGDLFTQFGSREMTRDDIVAAAIA
CEEECCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEHHHHHHHCCCCCCHHHHHHHHHH
AEDAFHATSLGLATAPTIRRLADLQPRTLALMHGPTFQGDGAHALRRLADYFEEMLRQPA
HHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA