Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486080

Identifier: 103486080

GI number: 103486080

Start: 598468

End: 598887

Strand: Reverse

Name: 103486080

Synonym: Sala_0587

Alternate gene names: NA

Gene position: 598887-598468 (Counterclockwise)

Preceding gene: 103486081

Following gene: 103486076

Centisome position: 17.9

GC content: 68.81

Gene sequence:

>420_bases
ATGCAAAGCCGCACATTGATCCGCCAGCTGACCGAGCAGCCGCTGGTGCGCGACCTCTCGGTCGATGCGGCGCAGGCGGT
GCTCGCCTTGCGCTATTCGATCCTCTGTCGGCGCAGCGGCCGCGACCCGATGCCCGAACTCGAGCGGCGCTGGGGCAATA
TGCTGGCAGCGCGGCGCTTCCGGCTGGTGGTCGAGGCGATCGCCCATATCTGGCCAGACCCCTTTGCCGTCGCGCCGCCC
TGCTGCCCGCGGCTCAGTTTCGACGAGGCGCTGCTCGCCGCGATGGTCGGAGCCGCGGCGCGCTGCGACCGCGTCGATTT
CGACTGGCGAACCGCCGAAATGCTGGGCAGCGACGCGCGCGAAATGCTGTTCGCCGCGCTGGAGAATTTCATTCGGGCAA
AGGCACCGGGGCGGGTTTAG

Upstream 100 bases:

>100_bases
CCGGCCGCTGCATCTTCAAGCTGCGACAAGGCGGCCGGCATCTTTTTCCGCTGCGATGCAGCGGACCGGCGGACTGCACC
GGGCCGGGAGAGAGAATGTC

Downstream 100 bases:

>100_bases
GCGGCCTCAGACATCGAGATGCATTGGCGGATATAGTTGGCCTGATTTGTGGTGAGAGCCTGCGGCGATGAAACGGTGAC
GCGTCGCCTTGCCACATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MQSRTLIRQLTEQPLVRDLSVDAAQAVLALRYSILCRRSGRDPMPELERRWGNMLAARRFRLVVEAIAHIWPDPFAVAPP
CCPRLSFDEALLAAMVGAAARCDRVDFDWRTAEMLGSDAREMLFAALENFIRAKAPGRV

Sequences:

>Translated_139_residues
MQSRTLIRQLTEQPLVRDLSVDAAQAVLALRYSILCRRSGRDPMPELERRWGNMLAARRFRLVVEAIAHIWPDPFAVAPP
CCPRLSFDEALLAAMVGAAARCDRVDFDWRTAEMLGSDAREMLFAALENFIRAKAPGRV
>Mature_139_residues
MQSRTLIRQLTEQPLVRDLSVDAAQAVLALRYSILCRRSGRDPMPELERRWGNMLAARRFRLVVEAIAHIWPDPFAVAPP
CCPRLSFDEALLAAMVGAAARCDRVDFDWRTAEMLGSDAREMLFAALENFIRAKAPGRV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15682; Mature: 15682

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSRTLIRQLTEQPLVRDLSVDAAQAVLALRYSILCRRSGRDPMPELERRWGNMLAARRF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RLVVEAIAHIWPDPFAVAPPCCPRLSFDEALLAAMVGAAARCDRVDFDWRTAEMLGSDAR
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHH
EMLFAALENFIRAKAPGRV
HHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQSRTLIRQLTEQPLVRDLSVDAAQAVLALRYSILCRRSGRDPMPELERRWGNMLAARRF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
RLVVEAIAHIWPDPFAVAPPCCPRLSFDEALLAAMVGAAARCDRVDFDWRTAEMLGSDAR
HHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHH
EMLFAALENFIRAKAPGRV
HHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA