Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103486066

Identifier: 103486066

GI number: 103486066

Start: 584830

End: 585312

Strand: Reverse

Name: 103486066

Synonym: Sala_0573

Alternate gene names: NA

Gene position: 585312-584830 (Counterclockwise)

Preceding gene: 103486067

Following gene: 103486065

Centisome position: 17.5

GC content: 68.32

Gene sequence:

>483_bases
ATGCTGACATCGCGCCTGGCCGCTCCCCTCGTCGCGCTGGCGGCGCCGTTGTTCCTCTATGGCGGCGCGCTGGTGTCGCA
ATTCGGCTTTGGCCTTCACCCTTGCGAAATGTGTTATTGGCAGCGCTGGCCGCATCAGGCGGCGATCCTGCTCGCGCTGC
TCGCGCTGCTGCTGCACCGCAATGCCGGGGCCATGCGCGCGCTCACCCTGCTCGCCGCCGCCGCCATTGCCGTCAGCGGC
ACGATCGGGGTGTTCCACGCCGGGGTGGAATATGGCTTCTGGGAAGGCATCACCACCTGCGCGACCGGCACCGGCGGGCC
GGTGACGCTCGAATCGATCATGGACGCGCCGCTCGTCCGCTGCGACGCGGTGCAATGGTCCTTGTTCGGCATCTCGCTGG
CGGGCTTTAACGCGATCTTCTCGTTCGGCGCCGCCACGCTCGTCTTGACCTTGCTGCGCGCCGGGCGCACATCGGCGGCA
TGA

Upstream 100 bases:

>100_bases
GCGCCGCAACTGACGCCATGCTTCCCGCCCCGTCATCCCGGCGCAGGCCGGGATCTCGACCTTGCAACCTGACGCACCGG
CGGGATTCCGAGGTTCCACC

Downstream 100 bases:

>100_bases
CCGATAAGCGCACCGCATCGATGATCCGCGTCGACCAGGCGGGCGAATTTGGCGCGACGCGCATCTATGCCGGCCAGCTC
GCCGTGATGGGCGACCGGCA

Product: disulfide bond formation protein

Products: NA

Alternate protein names: Disulfide Bond Formation Protein; Disulfide Bond Formation Protein DsbB; Disulfide Bond Formation Protein DsbB Family; Disulphide Bond Formation Protein; Disulfide Bond Formation Protein DsbB-Like Protein; DsbB Family Disulfide Bond Formation Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHRNAGAMRALTLLAAAAIAVSG
TIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVRCDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA

Sequences:

>Translated_160_residues
MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHRNAGAMRALTLLAAAAIAVSG
TIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVRCDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA
>Mature_160_residues
MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHRNAGAMRALTLLAAAAIAVSG
TIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVRCDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA

Specific function: Unknown

COG id: COG1495

COG function: function code O; Disulfide bond formation protein DsbB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16693; Mature: 16693

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
NAGAMRALTLLAAAAIAVSGTIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHCCCCCCCEEHHHHHCCCHHH
CDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLTSRLAAPLVALAAPLFLYGGALVSQFGFGLHPCEMCYWQRWPHQAAILLALLALLLHR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHC
NAGAMRALTLLAAAAIAVSGTIGVFHAGVEYGFWEGITTCATGTGGPVTLESIMDAPLVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCHHHHCCCCCCCEEHHHHHCCCHHH
CDAVQWSLFGISLAGFNAIFSFGAATLVLTLLRAGRTSAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA